Pseudomonas coronafaciens pv. oryzae: POR16_15040
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Entry
POR16_15040 CDS
T08147
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
POR16_15040
Enzymes [BR:
pcof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
POR16_15040
Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
POR16_15040
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
QGL57560
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Position
3353111..3355039
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AA seq
642 aa
AA seq
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MRSRLFSFLSCLLLSATAVQTAHAADLNQQRKYYDEAKRALAKGDSGPYQMYSTALADYP
LEPYLEYDELTARLKTASNAEIEKFLAEHGDLPQANWMKLRWLRWLAERGDWQPFVKYYD
PKMKFVELDCLYGQYQLNNNKRAEGYASAEKLWMTGKTLPAACDGFFAQWAAAGQLTEQK
RWQRAKLAAQARNYSLATTLVNSLNSLAPQGRLLLAVAQKPEMVNNPSQFAPVDEAMSDV
VGLGLRRLAKEDPQKVLSMLDGYSATMHFSREEQVEIAKEIGLTLARRYDDRALEVMTRY
DPELRDDTVTEWRMRLLLRLGRWEDAYELARRLPKDLAATNRWRYWEARSLELAQPNSPL
IAALYKDVAKERDFYGFLAADRTQSPYQLNNKPLVLSQALINKVRNTPGVRRALEFHDRG
EIVNGRREWYHVSRLFNRDEMVAQAKLAYDMQWYFPAIRTISQAQYWDDLDIRFPMAHRD
TLVREARVRGLHSSWVFAITRQESAFMDDARSGVGAAGLMQLMPATAKETARKYSIPLAS
PQQVLDPDTNIQLGAAYLSSVHAQFNGNRVLASAAYNAGPGRVRQWLKGANHLAFDVWVE
SIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERFFDDL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgtttgttcagctttttatcgtgcctgctcctctccgccaccgccgtccag
actgctcatgcggcagacctcaaccagcaacgcaagtattacgacgaagcaaagcgcgca
ctggccaagggcgattcgggcccctaccagatgtacagcacggcattggccgactatccg
ctggagccgtatcttgaatacgatgagctgacggcacgcctgaaaacggcaagcaatgcc
gagatcgagaagtttctcgccgaacatggcgacctgccccaggccaactggatgaagctg
cgctggttgcgctggctggccgagcgtggcgactggcagcccttcgtcaagtactacgac
cctaaaatgaagttcgtcgaacttgactgcctgtatgggcaataccagttgaacaataat
aaacgcgccgaaggctatgccagtgccgaaaagctctggatgaccggcaagacactgccg
gcggcgtgtgacgggtttttcgcccagtgggcggcagcgggccagttgaccgaacaaaag
cgctggcagcgggccaaactggccgcccaggcgcgtaactacagcctggcgaccacgctg
gtcaacagcctcaattcgctggccccacagggtcgcctgttactggctgtcgcccagaaa
ccggagatggtcaacaacccgtcgcagttcgcgcccgtggacgaagcgatgtccgatgtg
gttggtctaggtctgcgtcgcctggcaaaggaggacccgcaaaaagttctgtcgatgctc
gatggctactcggcgaccatgcacttctctcgcgaagaacaggtcgagattgccaaggaa
atcggtctgaccctggcacgtcgttacgacgaccgtgcgctggaggtcatgacccgatac
gaccctgaactgcgcgacgatacggtcaccgaatggcgtatgcgcctgctcctgcgcctg
ggccgctgggaagatgcgtacgagctggcgcggcgactgcccaaggacctcgcagccacc
aatcgctggcgctactgggaagcccgctccctcgaactggcccagcccaatagcccgttg
attgcagcgctgtacaaggatgtggccaaggaacgcgacttctacggttttctggcggcc
gatcgcacccagagcccgtaccagctcaacaacaaaccgctggtgctcagccaggcgctg
atcaacaaggtgcgcaacacgcctggcgtgcggcgcgcactggaatttcacgaccgcggc
gagatcgtcaacgggcgacgcgagtggtatcacgtcagccgcctgttcaaccgcgacgaa
atggtcgcacaggccaaactggcctacgacatgcaatggtatttcccggcgatccgcacc
atcagtcaggcacagtactgggatgatctggacatccgcttcccgatggcgcatcgcgac
acactggtgcgtgaagcgcgagtaaggggtctgcattccagctgggtgttcgccatcact
cgccaggaaagcgcgttcatggacgatgcacgttcaggtgtcggcgctgcagggctgatg
cagttgatgcctgcgaccgcgaaggaaaccgcgcgcaagtacagcatcccgctcgcctcg
cctcagcaggttctggacccggacaccaatatccagctgggggcagcctacctgagctcg
gtacatgctcagttcaatggcaaccgcgtacttgcctcggccgcctacaacgcaggaccg
ggccgtgtgcgtcagtggctcaagggtgccaatcacctggccttcgacgtctgggttgaa
agcatcccgttcgacgaaacccgtcaatacgtgcaaaacgtgctgtcgtactcggtgatc
tacggtcagaaactcaactcgccgcaacccttggtcgactggcacgagcggtttttcgac
gacctctga
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