Pseudomonas coronafaciens pv. oryzae: POR16_15085
Help
Entry
POR16_15085 CDS
T08147
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K20998
polysaccharide biosynthesis protein PslE
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
POR16_15085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GNVR
Wzz
TPR_MLP1_2
DUF4349
Bacillus_HBL
Occludin_ELL
Motif
Other DBs
NCBI-ProteinID:
QGL57569
LinkDB
All DBs
Position
3363842..3365833
Genome browser
AA seq
663 aa
AA seq
DB search
MINIRSFRDLLRLFFIFKREVKITVLATFVIILLGAFLLPNRYESTALLLVKPGRDSSTV
PIELSDRQAIVIPSGLRDPLLDEERMLSGRPIMRAVSEKYLAELSMAPPETGVLASIKNG
VKAVVGGVVNGVRSVLQFIGLVEHRSQVERLAEDLEKNFKVRHEPGSSVMELTFTWNDPA
TAQTVLKTWIDEYQSQRTKTLGRVSLYAFYEAEVKTTGENIIEYKKQIQNYLNQLSAVSI
SQRLADTSQGLNDLRTERNNTTRSIASTKAGLDLLKKQLSEQPKTVSAGRELALNPNRQD
LQNRINGKEVERQEMLRSFKDQAPPIRAINEEIDNLKKLLNGQEATVQRSESITPNPIYN
RMQNVYADQQTSYARLQTQLAQQNAQIAQLENDRQQALNLEPELSRLQNELDASEKSYAL
YKDSLEKSRIDRELDNSQISNIATIEEATFNPSRVFPKSLLMLLLAFPLSVVVGALALYF
FYLLDQRIHDGDKIESSFGVPVWTSLPDLERAQERSAAFTSNLHRVYGILPLDQVDGQGL
TLGFTSVKSGAGVAFVIERLRTLLVEQGHQVRTEGRSPASPGEIVLINASALSANQDAFV
LLRKADLIVLVVRAEETTVPMLEDTLNNLNTAFKKVDGIIVNRRRFEVPERVLKFLKRFG
SRG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacatccgctcattccgcgacctgctgcgcctgttctttatcttcaagcgcgaa
gtcaagattaccgtgctggcgaccttcgtcattattctgctgggcgcctttctgctgccc
aatcgctatgaatcaacagctctgctgctggtcaagcccggccgcgacagcagcactgtg
cctatcgagctttccgaccgtcaggccatcgtcatacccagcggcctgcgtgacccgctg
ctcgacgaagagcgcatgctcagcggccgaccgatcatgcgcgcagtgtccgagaagtac
ctggcggagctgtcaatggcaccccctgaaaccggcgtgctggcatcgataaagaacggc
gtcaaggcagtcgtcgggggcgtcgtcaacggcgtgcgcagcgtcctccaattcatcggt
ctggtggaacaccgctcgcaggtcgagcggctggccgaagacctggaaaagaacttcaag
gtccgccatgagcctggttcctcggtaatggaactgacctttacctggaacgaccccgcc
acggcacaaacagtactcaagacgtggatcgatgaatatcagtcgcagcgcaccaagact
cttggccgggtcagcctgtatgcgttctacgaagcggaggtgaagactaccggtgagaac
atcatcgaatacaagaagcagattcagaactacctgaaccagctcagcgcagtcagtatt
tcccagcgactggccgatacgtctcaggggctcaacgacctgcgcaccgaacgcaacaat
acaacgcgctccatagcctcgaccaaggcaggcctggacctgctgaaaaagcagctgtcc
gagcagcccaagaccgtctccgccggacgcgagctggcgctcaatcccaatcgccaggac
ttgcagaaccgcatcaatggcaaggaagtggagcgccaggaaatgctccgctcgttcaag
gaccaggcgccaccgattcgggcgatcaatgaggaaatcgataacctcaagaaactgctc
aacggacaggaggcaactgttcagcgctccgaaagtatcacgcccaaccctatctacaac
cgcatgcagaacgtctacgccgatcagcagaccagctacgcacgcctgcaaacccagctt
gcgcagcagaatgcacaaatcgctcaactggaaaacgatcgccagcaggcgctgaatctg
gagccggagctttcacgcctgcagaacgagctggatgcctcggaaaaaagctacgcgctg
tacaaggacagtctggaaaaatcccgcatcgaccgcgagctggacaacagccagatcagc
aacatcgcaaccattgaagaggcaacgttcaaccccagccgggtctttccgaaaagcctg
ttgatgctgctactggcgtttcctttgagcgttgtggtgggcgcgctggcgttgtacttc
ttctacctgctggatcagcgcatccatgacggcgacaagatcgagagcagctttggcgtg
ccggtctggaccagcctgccagatctggagcgcgcgcaggaacgcagcgctgcctttacc
tccaacctgcaccgtgtttacggaatcctgccgctggatcaggtcgacggacagggcctg
accctcggctttacttcggtcaagtcgggcgcgggtgtggccttcgtgatcgagcggctg
cgcacgttgctggtcgagcagggccatcaagtccgcactgaagggcgcagccctgccagc
ccgggtgaaatcgtgctgatcaacgcctcggcactgtccgctaatcaggacgctttcgtg
ctgctgcgcaaggctgatctgatcgtactggtggtgcgtgccgaagaaaccaccgtgccg
atgctcgaggacacactgaacaatctcaataccgccttcaagaaggtcgacggcatcatc
gtcaaccggcgccgtttcgaagtgccggaacgcgtgctgaagttcctcaagcggttcggg
agtcgaggctga
DBGET
integrated database retrieval system
