Pseudomonas coronafaciens pv. oryzae: POR16_15300
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Entry
POR16_15300 CDS
T08147
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02020
Two-component system
pcof02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
POR16_15300
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
POR16_15300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcof02035
]
POR16_15300
Bacterial motility proteins [BR:
pcof02035
]
Flagellar system
Chemotaxis proteins
MCPs
POR16_15300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
TarH
AAA_13
FAM70
Mce4_CUP1
IFT57
Motif
Other DBs
NCBI-ProteinID:
QGL57609
LinkDB
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Position
complement(3412597..3414237)
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AA seq
546 aa
AA seq
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MNFLRQLKFSTKLISAFIVCALITLAVGGLGMAGVTRLGNALELTFSNNLVSVGNTNETL
TSLTAHNRGLYRLLDAQDGGVPEADMERVRQALGDDLARAQKVFATYRATPLEDDERVAG
DQLEQMLPAYIAGSQQVVELMKAGNLDSARTRLNTLSADGFAKARGYLRTMIESNNRQIK
EGAVAASELKSRSVLMLEVGVVIAFLVAIMLGVFITRMITRPLAVAVTSAQRIAGGDLTQ
PIVSTSGDEAGQLLDALSGMQTGLKHTIQQIASAADQLASAAEELSAVTDESTRGLTRQN
DEIQQAATAVNEMTAAVEEVARNAVSTSEASKTATDDAIDGRGQVDHTVKGITTMVHEIT
ASTGAVSELAGHVREISKVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRA
LAHRTQASTVEIEGMISTVQSGADGAVAAMGKSLTLATNTQELALRAGSALEKITMGVAT
INERNMVIASASEEQAQVAREVDRNLINIQDLSTQSAAGANQTSASSQELSRLATSFNLL
VANFKL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcctgcgtcagttaaagttttcgaccaagcttatttcggcattcatcgtttgc
gcactgatcacgctggctgtcggcggtctgggcatggcaggtgttacccgtctgggcaat
gcgcttgagcttactttttccaacaacctggtctctgtcggcaataccaatgaaacgctt
accagcctgacagcgcataaccgcggcctttaccggttgctggatgcgcaggatggcggt
gtgcccgaggctgacatggagcgtgttcgtcaggcgctgggcgatgaccttgctcgtgcg
cagaaagttttcgcaacctaccgggccactcctctggaagatgacgagcgcgtcgctggc
gaccagttggagcaaatgctgcctgcttatatagcgggctctcagcaagtggtcgaattg
atgaaggctggcaatctcgatagcgcccgcactcgtttgaacacattatccgcagacgga
tttgccaaggcgcgtggttacttgcggacaatgatcgagtccaacaatcgccagatcaag
gaaggggcggtggcggcgtccgagctcaagtccagatcagtgctgatgcttgaggtgggc
gtggttattgcctttctggtagcgatcatgctgggtgtattcatcactcgcatgatcacc
cgaccactggcggtggcagtaacaagcgcccagcgcattgccggcggtgacctgactcag
cctatcgtttccaccagcggtgatgaggctggtcagttgctcgatgcgctgtcggggatg
cagaccggtctgaaacacacgattcagcagatcgccagcgccgccgaccagctcgcttcg
gcagccgaggagctgagcgcggtcactgacgagagtactcgcgggctgactcgccaaaac
gatgaaattcagcaggcggcgactgcggtcaacgagatgaccgctgcagtagaggaagtg
gcgcgcaatgcggtgtcgacatccgaagcgtcgaagaccgcgacggatgacgcaatcgat
ggtcggggtcaggtcgatcacactgtcaaaggcatcaccaccatggttcatgagatcacc
gcatccacgggtgccgtttctgaactggccgggcatgtccgggaaatcagtaaagtgctc
gacgtgattcgcagcattgccgagcagaccaatctgctggcgctcaacgccgccatcgaa
gcagcgcgtgcaggtgaacagggccgcggctttgcggtagtggccgatgaggtccgtgct
ttggcgcaccgtactcaggcatcgacagtggaaatcgaagggatgatcagcacagtgcag
tcaggtgccgatggtgccgttgctgcaatgggtaaaagcctgacgctggcgaccaatact
caggaactggcgctgcgggccggttcggcgctggaaaaaatcactatgggtgtagcgacc
atcaacgaacgtaacatggtaattgcctccgcttccgaggagcaggcccaagtggctcgc
gaggttgaccgtaacctgatcaacattcaggacctttcgacgcagagtgctgctggcgcg
aatcagaccagcgcttcgagtcaggaactgtcgcgtcttgctacctcgttcaatttgctg
gttgccaacttcaagctttaa
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