Pseudomonas coronafaciens pv. oryzae: POR16_15710
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Entry
POR16_15710 CDS
T08147
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02020
Two-component system
pcof02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
POR16_15710
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
POR16_15710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcof02035
]
POR16_15710
Bacterial motility proteins [BR:
pcof02035
]
Flagellar system
Chemotaxis proteins
MCPs
POR16_15710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HBM
HAMP
Syntaxin_2
S6PP_C
CdiA_C
NYD-SP28_assoc
Cas_Cas4
ISG65-75
Motif
Other DBs
NCBI-ProteinID:
QGL57684
LinkDB
All DBs
Position
complement(3498186..3500114)
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AA seq
642 aa
AA seq
DB search
MSAKWLDNLKVSKKLGLGFAAILLGVLTVTAIGYSSTNLLIERMGKSSKVAEIKADVLSA
RIAAQAYATGPSPAGVQTYSSALDTLNRSVDDGLRVFVVSSNLEKLRGIKEQVGGLKQTF
EQLVSINQKVDDALKPIIKVSDDVSATFENLLNKTIDDTLRVPDETGIKQVKIAGDLRNG
MTNFRLVFRRYLSIPSADNRQATYNAADALIAQVGAARSQLPVEANASVDAALAALKQYK
VLMTSISEMLQQTDQIRGNLQQQSVATAARADDLATQQVISAKKEQDTAVMQLLSVAVVV
LLIGIFAAFVITRQITAPLNDTVIAARRIADGDLTHDISTIRQDELGLLQNTMQHMTVSL
RSLIGGIGNGVTQIATAAEELSAVSEQTSAGVSLQKTEVDQVATAMNQMASTVQEVARNT
EDASRAAKQASERAAHGSSVVQHATREIGQLAGEVKQLGEAMQRLTEDSGKIGSVIDVIK
AVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEALILTLQQGTG
AASGLMDASLQRTEGTVVLARQAEQALVEINQSISTIEQMSQQISAAAEQQSSVTDEINR
SVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVARFRI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaatggttggacaacttgaaagtcagcaagaagctcgggctgggcttcgcg
gctattttgctgggtgtattgacggtgacggccatcggttactccagcactaacctgttg
atcgaacgcatgggcaagagtagcaaggtcgccgagatcaaggctgacgttttgagcgcg
cgtatcgctgcacaagcctacgccacaggccctagcccagcgggtgtgcagacttactca
agcgcactggatacgctgaatcgcagcgtcgatgatgggctgcgggtatttgtggtgtcg
agcaacctggaaaaactgcgaggcatcaaggagcaagtcggcgggctgaagcagacgttc
gaacagttggtcagcatcaaccagaaagtcgatgatgcgctgaaacccatcatcaaagtg
tccgatgatgtcagtgccactttcgagaacctgctgaacaagaccattgacgacaccttg
cgtgtgccggatgaaaccggcatcaaacaggtcaagatcgctggcgacctgcgcaatggc
atgactaatttccgtttggtatttcgtcgctacctgagtatcccttctgctgataatcgt
caggccacttataacgcggctgacgcgttgatcgctcaggtgggtgccgcccgcagccag
ttgcctgtcgaggcgaatgcctcggtagatgctgcgctggctgcattaaaacaatacaaa
gtgctgatgacttcgatctcggaaatgcttcagcagaccgaccagatacgaggcaatttg
caacagcagtctgttgcgaccgctgctcgtgcagacgatttggcgacccagcaggtaatc
agtgccaaaaaagagcaggacactgctgtcatgcagctgttgagtgtggcggtggtcgtg
ctgctgatcggcatttttgctgcattcgtgatcacccgccagatcaccgcgccattgaat
gacacagtcatcgccgcgcgtcgtatcgccgacggtgatctgactcatgacatcagcacg
attcgtcaggacgaactgggcctgttgcagaacaccatgcagcacatgaccgtttccctg
cgcagtctgatcggtggtatcggcaacggtgtcactcaaattgctacagcggccgaggag
ttgtctgccgtgagtgagcagaccagtgccggtgtttccttgcagaagaccgaagtggat
caggtggcgaccgctatgaaccagatggcttccaccgtgcaggaagttgcgcgcaatacc
gaagatgcttcgcgggcggccaagcaagccagcgagcgtgcggcccacggaagcagtgtg
gtgcagcacgctacacgtgaaatcggtcaactggccggtgaagtgaagcagctcggtgag
gccatgcagcgtctgactgaagacagtggcaagatcggcagtgtcatcgacgtgatcaaa
gctgtcgccgaacagaccaacctgctggcactcaacgcggccatcgaggctgcacgtgcc
ggtgaacagggccgtggttttgcggtagtagccgacgaagttcgctcgctggcccagcgt
actcagaactcgaccactgaaatcgaagcgctgatcctgaccttgcaacaaggcaccggc
gccgcttcgggcctgatggacgccagcctgcaacgcaccgaaggtactgtggttctggcc
cgccaggctgaacaggcactggtggagatcaaccagtcaatcagtactattgaacagatg
agccaacaaatttccgctgccgccgagcaacaaagctcggtgacggacgaaatcaaccgc
agcgtattgagtgttcgcgacatcgccgatcagtcggcctctgcgaccgagcagagcgca
gcgtcgacagtcgaactggcccgcttgggcagcgatctgcagagcatggttgcgcgcttc
aggatttaa
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