Pseudomonas coronafaciens pv. oryzae: POR16_15835
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Entry
POR16_15835 CDS
T08147
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02020
Two-component system
pcof02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
POR16_15835
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
POR16_15835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcof02035
]
POR16_15835
Bacterial motility proteins [BR:
pcof02035
]
Flagellar system
Chemotaxis proteins
MCPs
POR16_15835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP
Cache_3-Cache_2
DUF5930
DUF4492
PG_binding_2
CaKB
RNase_H
Arfaptin
Motif
Other DBs
NCBI-ProteinID:
QGL57706
LinkDB
All DBs
Position
3548900..3550531
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AA seq
543 aa
AA seq
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MNMRSVSISRRLWLILVVSVLMFLILAATLLKQTHDDLYRAKAEKTMHVVQTASGILGYY
QGLEAAGSLTREAAQQQALKQIKGLRYSQSDYFWINDLQPVMIMHPTNPKLDGQNLSAIR
DPDGFAVFNEMVTLVKSQGAGMVNYRWPKPGASEPVKKTSYVQLFQPWGWILGSGVYVDD
VAAEFEAQLLSTGLFIAGIVLVMVLLLTLIVRSIVRPLKAAVGAMADIASGESDLTRTLE
THGKDEITELGTHFNAFVAKLRNVVSLLQNSSMALGIAASESGSNAEQAQNRSLQQSQQM
DLVATAVNEVTYGVQDVAKNAEHAASEMRDAESRAQQGQINIDNSLRQIEHLSGTIGQAV
DVMHNLSSESTKIGSVLEVISSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQ
RTQKSTAEIQAIIERLQTYSDAAVKVIGDSSRSSQLTIEQANQAGQSLTSISQALRNLNS
LNASIASATLQQTHVVDDINQNVTQAAQLSQSTAMAAEQSTSASQHLRELSEELSALLKQ
FKV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcgcagtgtgtccatcagccgccgcttgtggctgatccttgtggtttctgtg
ctgatgtttctgattctcgcagccaccctgctcaaacagacacatgatgacctgtaccgc
gcgaaggctgaaaaaaccatgcacgtggtgcagacagcgagcggcatactcggttactac
cagggccttgaagcggctggcagcctgacgcgtgaggctgcacagcagcaggcgctgaaa
cagatcaaagggctgcgctacagccagagcgactatttctggatcaatgatctgcagccc
gtgatgatcatgcaccccaccaaccccaagctcgatgggcaaaacctttcggccatccgg
gacccggatggctttgcggtgttcaatgaaatggtcaccctggtcaaaagccagggcgcc
ggcatggtcaactatcgctggccgaaaccgggcgccagcgaaccggtgaaaaagacctct
tatgtgcaactgttccagccgtggggctggattctcgggtccggcgtttacgtggacgac
gtagccgccgagttcgaggcccagctgctgagcaccggactattcattgcaggtatcgtg
ctggtcatggtgctgctgctgaccctgatcgtacgcagcatcgttcgtccgctgaaagcc
gctgtgggcgccatggccgatattgccagcggtgaaagcgacctgacccgcaccctggaa
acccacggcaaggacgagatcaccgaactgggtacgcacttcaacgctttcgtcgccaaa
ctgcgcaacgttgtcagcctgctgcagaactcttcgatggctctgggcattgctgccagc
gagtcgggcagcaatgccgagcaggcgcagaaccgcagcctgcagcaatcgcagcagatg
gacctggtggcaactgctgtcaatgaagtgacctatggcgtccaggacgttgccaagaac
gccgagcatgcggccagcgaaatgcgcgacgccgaatcgcgggcgcagcaggggcagatc
aacatcgacaacagcctgcgtcagatcgagcacctctccggcactatcggtcaggccgtt
gacgtgatgcacaacctgtcgagcgaaagcacaaagatcggcagcgtactggaggtaatc
agttcgattgccgatcagaccaacctgcttgcgctgaacgccgccatcgaagcagcacgc
gcaggtgaacagggccgcggctttgccgtggtagccgatgaggtgcgcctgctggcccag
cgcacccagaaatccaccgcagaaatccaggccataatcgaacgcctgcaaacgtattcc
gatgccgccgtcaaggtgatcggcgatagcagtcgctcctcgcaactgaccatcgaacag
gctaatcaggccggtcagagcctgacctccataagccaggccctgcgcaacctaaacagc
ctgaatgcgtccatcgccagtgccacactgcaacaaacgcacgtggtggacgacatcaac
caaaacgtcacgcaggcggcgcagctatcccagagcactgcaatggctgccgagcagtcc
acctcggccagccagcatctgcgagagttgagtgaagaattgagcgcgctgctgaaacag
ttcaaggtttaa
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