Pseudomonas coronafaciens pv. oryzae: POR16_15895
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Entry
POR16_15895 CDS
T08147
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof03030
DNA replication
pcof03430
Mismatch repair
pcof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
POR16_15895 (dnaQ)
03430 Mismatch repair
POR16_15895 (dnaQ)
03440 Homologous recombination
POR16_15895 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcof03032
]
POR16_15895 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pcof03400
]
POR16_15895 (dnaQ)
Enzymes [BR:
pcof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
POR16_15895 (dnaQ)
DNA replication proteins [BR:
pcof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
POR16_15895 (dnaQ)
DNA repair and recombination proteins [BR:
pcof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
POR16_15895 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QGL57718
LinkDB
All DBs
Position
complement(3566918..3567691)
Genome browser
AA seq
257 aa
AA seq
DB search
MAVQNLDNRSIVLDTETTGMPVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRESDEGA
IGVHGITNEFLVGKPRFAEVADEFFEFIKGAQLIIHNAAFDVGFINNEFALMGDQDRSDI
TRHCSILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLAMTGG
QTSLSLAGNASDGNGSGEGSGNRGSEIRRLPANRKPCRVIRASESELAEHEVRMSTIAKA
SGASALWVQMLEAGTQT
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcaaaacctggataacagatcaatcgttctcgacaccgaaaccaccggcatg
ccggtgaccgacggtcaccgcatcatcgagatcggttgtgtcgaactgatcggtcgtcgc
ctgaccgggcggcattttcatgtgtacctgcagcccgaccgcgagagtgatgaaggcgcg
attggcgttcacggtatcaccaacgagtttctggtcggcaagcctcgctttgccgaagtc
gccgatgagttcttcgagttcatcaagggcgcgcagcttatcattcataacgcggcgttc
gacgtaggcttcatcaacaacgaatttgcgttgatgggcgatcaggacaggtctgacatc
actcggcactgttcgattctcgacaccctgatgatggcccgcgagcgccatccgggtcag
cgcaacagcctggatgccctgtgcaagcgttacggcgtcgataactccggccgtgagctg
cacggcgcgctgctcgactccgagattctggcagatgtttatctggcgatgaccggcggg
caaaccagcctgtcgctggctggcaatgcttccgatggcaatggctcaggcgagggctcc
ggcaatcgcggcagcgaaattcgccgcctgccagccaatcgcaagccttgccgggtgatt
cgtgcatcggaaagtgaactggccgagcatgaggtgcgtatgagcaccattgccaaggct
tccggtgcgtctgccctgtgggttcagatgctcgaagccggtacgcagacgtga
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