Pseudomonas coronafaciens pv. oryzae: POR16_17220
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Entry
POR16_17220 CDS
T08147
Name
(GenBank) outer membrane porin, OprD family
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof01501
beta-Lactam resistance
pcof02020
Two-component system
Module
pcof_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
POR16_17220
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
POR16_17220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcof02000
]
POR16_17220
01504 Antimicrobial resistance genes [BR:
pcof01504
]
POR16_17220
Transporters [BR:
pcof02000
]
Other transporters
Pores ion channels [TC:
1
]
POR16_17220
Antimicrobial resistance genes [BR:
pcof01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
POR16_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QGL57954
LinkDB
All DBs
Position
3848325..3849647
Genome browser
AA seq
440 aa
AA seq
DB search
MRVMKWSAIALAVTAASAQLATAAPFVSDQAEAKGFVEGSTLDLKLRNYYYNRDKKAGAA
DDRDWTQGIWANFSTGYTQGTIGVGVEAFAYAGVKLWGPDKYSGSGNLITDSAGNNEDTQ
SKAGGAVKFRVSKTELKVGDMQPTSPVFGVGGSRLLPQTASGISLQSSELKGLDVEAGHF
YSGTSQDDTSHGGGIFANYAGVEAKSADFAGGKYAITDSLGVAFYAAKLEDIWDQYYGNV
NYALPLGGDQSLAFDANIYRTVDEGSAKAGSISNTAFSGSAAYSFLAAHTVTLAFQKING
DTPFDYIGIGDNNRGGDSIFLNNSIQYSDFNGPGEKSWQARYDLNMTPYGVPGLSFMTRY
IKGTDIDGTKTPAGSAYAGLYGADGEHHETNLEAKYVVQTGPAKDLSFRARQAWHRANAD
QGEGDVNEFRLIVDYPISIL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgatgaagtggagcgcaatcgcactggccgtcacggctgccagcgcccaactg
gcaacagcggcacctttcgtcagcgatcaggctgaggccaagggtttcgttgaaggcagc
acgcttgacctgaagctgcgcaattactattacaaccgcgacaagaaagccggcgctgct
gacgatcgtgactggacccaaggtatctgggccaacttcagcaccggttacacccaaggc
accatcggtgtcggcgtagaagctttcgcttacgctggtgtgaaactctggggcccggac
aaatattcgggttcgggtaacctgattaccgactctgccggcaacaacgaagacacacag
agcaaggccggtggcgctgttaaattccgcgtttcgaagactgagctgaaagtgggcgac
atgcagcccacgagccctgtgtttggagtcggcggctcgcgcctgctgcctcagacggca
agtggtatcagcctccagagcagcgagcttaagggcctggatgttgaagcgggtcatttc
tactcaggcaccagccaggatgacaccagtcacggcggcggcatcttcgcaaactatgct
ggcgttgaagccaaaagcgcagactttgccggcggcaaatacgccatcaccgatagcctt
ggcgtggcgttctacgcagccaaactcgaagatatctgggatcaatactacggtaacgtg
aactacgcgctgccactgggtggcgatcagtcgctggcgttcgacgctaacatctatcgc
accgttgacgaaggcagcgcaaaagctggctctatcagcaacaccgcgttctccggctcc
gcagcctactcgttccttgctgcgcacaccgtgaccctggcgttccagaagatcaacggt
gacacgccgttcgactacatcggtatcggcgacaacaaccgcggtggcgattcgatcttc
ctgaacaactcgattcagtactccgacttcaacggtccgggtgaaaaatcctggcaggct
cgctacgacctgaacatgactccgtacggcgtgcccggcctgagcttcatgacccgctac
atcaaaggtaccgacatcgacggcaccaaaacacctgctggcagcgcttatgctggcctg
tacggtgctgatggcgaacaccacgagaccaaccttgaagccaaatatgtcgtccagacc
ggcccggccaaggacttgtccttccgtgctcgtcaggcatggcaccgcgccaacgccgac
caaggcgaaggcgacgtcaacgagttccgcctgatcgtcgattacccgatctcgatcctg
taa
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