Pseudomonas coronafaciens pv. oryzae: POR16_17565
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Entry
POR16_17565 CDS
T08147
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcof03016
]
POR16_17565 (tcdA)
Transfer RNA biogenesis [BR:
pcof03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
POR16_17565 (tcdA)
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GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
3HCDH_N
F420_oxidored
NAD_binding_7
DAO
ELFV_dehydrog
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
QGL58018
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All DBs
Position
complement(3921148..3921978)
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AA seq
276 aa
AA seq
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MNTDDPRFAGIARLYGIEGLARLRAAHVAVVGIGGVGSWAAEAMARSGVGEISLFDMDDV
CVSNSNRQLHALDSTVGRPKVEVMAERIRAINPDCVVHAVTDFVTRDTMAECITQDMDFV
IDCIDSVNAKAALISWCKRRKIQMVTTGGAGGQIDPTLIQIADLNRTFNDPLASKVRSTL
RRDYGFSRTPNRHYSVPCVFSTEQLRYPKPDGSICLEKKFVGDGVKLDCAGGFGAVMMVT
ATFGMVAATRAVDKLVAGTRRPSERVKPLAATDVQA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagacgatccacgtttcgcaggcatcgcccgtttgtacggcattgaggggctg
gcacgtctgcgcgcggctcacgtggcggtggtcggtatcggcggcgtgggctcgtgggcg
gcggaagcgatggcgcgcagtggcgtgggcgagatttcgctgtttgacatggacgatgtc
tgtgtcagcaacagcaaccgccagttgcatgcgctggacagcacggtcggacggccgaag
gtcgaggtaatggccgagcgcattcgggctatcaaccctgattgcgtcgtacacgctgta
acggatttcgtgacccgcgacaccatggccgagtgcatcactcaggacatggactttgtg
atcgactgcatcgacagcgtcaacgccaaggctgcgctgatctcctggtgcaaacgacgc
aagattcagatggttaccaccggcggtgcgggcgggcagattgatccgaccctgatccag
atcgccgacctgaaccgtacgttcaatgacccgctggcctccaaggtgcgctctacactg
cgtcgcgattacggcttttcgcgcaccccaaaccgccattacagcgtgccttgtgtgttt
tccaccgagcaactgcgttatccgaagccggatggcagcatctgtctggaaaagaagttt
gtcggtgatggcgtcaagctggactgtgcgggcggtttcggcgcggtaatgatggtcacc
gcgacgtttggcatggttgccgcaacccgcgccgtggacaagctggtcgcagggacgcga
cgaccgtccgagcgggtcaaaccgctagctgcaacagacgttcaggcctga
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