Pseudomonas coronafaciens pv. oryzae: POR16_17975
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Entry
POR16_17975 CDS
T08147
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcof03009
]
POR16_17975 (der)
Ribosome biogenesis [BR:
pcof03009
]
Prokaryotic type
GTPases
POR16_17975 (der)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
NOG1
Ras
ABC_tran
DUF5906
SRP54
AAA_24
NTPase_1
AAA_18
cobW
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QGL58096
LinkDB
All DBs
Position
complement(4025295..4026764)
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AA seq
489 aa
AA seq
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MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANKI
DNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLEIALREFPRDEDDLEEGEVEEVAEG
QEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFERN
EEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF
ALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLYQSV
QNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGNQVE
KVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNTLTDRQVNKKRRMMSHHKK
ADKKRRDKR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggtcgaccgaacgtcggcaagtccaccatgttcaac
cgcctgaccaggacccgcgacgctattgtcggcgatctgtccggtcttacccgtgatcgc
caatacggagaggcgaagtggcaagggcgctcctatattctgatcgacaccggcggtatc
tccggtgacgagcatggcatggacgaaaaaatggccgagcagtctctgctggccattgaa
gaagccgatgtggtgctgtttctggtggatgcccgtgcgggctataccgccgctgatcag
atgattggtgagcacctgcgcaagcgcaacaagcgttcctacgtggttgccaacaagatc
gacaacatcgatgagaacctggcgcgtgccgagttcagcccgatggggctgggcgacgcc
attccggtggccggcgctcacggtcgcggcatctcgcagatgctcgaaatcgctctgcgg
gaattccccagggacgaggacgaccttgaagaaggtgaggtcgaggaagttgccgaaggt
caggaagccaagcgcattccgggcccgagcgaaaaagacggtatcaagattgcgatcatc
ggtcgtccgaacgtcggcaagtcgacgctggtcaaccgtatgctcggtgaagaccgggtt
atcgtttatgacgagcctggcaccacgcgtgacagcatctacattcccttcgagcggaat
gaagagaagtacacgctgatcgacacggcaggtgtgcgcaagcgcggcaagatccacgaa
gaagtcgaaaagttctctgtggtcaagaccctgcaggccatcaaggacgccaacgtggtg
atcttcgtgatggacgcccgggaaggggtggtcgatcacgatctcaacctgctgggcttc
gctctcgaggcgggtcgtgcactggtcatcgcgctgaacaagtgggacggcatgacgccg
ggcgaacgtgatttcgtgaagatcgaactggaacgccggttgttcttcgtcgatttcgcg
gacatccacttcatctcggccatgcacggcacgggcgtaggcaacctttatcagtcggtg
cagaactcgttcaagtcggccgtaacgcgctggccgaccagccgtcttacgcagatactc
gaagacgcggtcagcgagcatgcgccaccgatggtcggcagccgccgcatcaagctgcgc
tacgctcacctggggggtgccaacccgccgctgatcgtgattcacggcaaccaggtcgag
aaagtacccaagtcttacgtgcggtatctggaaaacacctatcgccgtgtgctcaagctg
gtcggtacgccgatccggatcgagttcaaaggtggcgagaacccgtatgaaggcaacaag
aacacgctgacggaccgccaggtcaataagaagcgtcgaatgatgtcgcaccacaagaaa
gccgacaagaagcgccgcgacaagcgctga
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