Pseudomonas coronafaciens pv. oryzae: POR16_19965
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Entry
POR16_19965 CDS
T08147
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00550
Peptidoglycan biosynthesis
pcof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
POR16_19965 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcof01003
]
POR16_19965 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
POR16_19965 (mrcB)
Enzymes [BR:
pcof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
POR16_19965 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
POR16_19965 (mrcB)
Glycosyltransferases [BR:
pcof01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
POR16_19965 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
POR16_19965 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
PBP1_TM
PBP1c_linker_2
Motif
Other DBs
NCBI-ProteinID:
QGL58456
LinkDB
All DBs
Position
complement(4447400..4449721)
Genome browser
AA seq
773 aa
AA seq
DB search
MTRSRTSRSPKKQPPRSLHKWLGWALKLGIVGLVLLGGLAIYLDAIVQEKFSGKRWTIPA
KVYARPLELFVGQKLSRDDFLIELDALGYRRESVANGPGAAAVNGNTVDLNTRGFQFYEG
TDVAQQVRVRFSGDSVADLSSGNGAKLAVARLEPLLIGGLYPKNLEDRILIKLDQAPPYL
LDGLVAVEDRDFYHHFGVSPKSIARAIWVNSSQGQMRQGGSTLTQQLVKNFYLTNERSLT
RKLTEAMMAILLEIHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQYFFSQPLSELKIH
QVAMLVGLVKGPSFYNPRRNPERALERRNLVLDLFEQQGVATPEVVAAAKKMPLGVTKTG
TLADSSFPAFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKSQAAMDDTFKKLAGR
KGVDEVQAGMVVTNPETGEVQALIGGREAGFSGFNRAIDAVRPIGSLVKPAIYLTALERP
SQYTLTSWIADELFQVKGADGQIWKPQNYDHKSHGNIFLYQGLAHSYNLSTAKLGLDLGI
PNVFKTLAKLGVTREWPVYPSMLLGAGGLSPMEVATMYQTIASGGFNTPMRGIRSVLTAE
GEPLKRYPFKIEQRFDPGAIYLVQNAMQRVMREGTGKSVYNVLPSSLNLAGKTGTSNDSR
DSWFAGFSQDLLAVVWMGRDDNGKTPFTGATGALQVWTSFMRKANPLPLDMAMPDNVVQA
WVDAQTGQGSDASCPNAVQMPYIRGSEPQPGATCGGAPAPATEVMDWVKGWLN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatcccgcacctctcgttcccctaaaaagcaacctccccgcagcctgcacaag
tggctgggctgggcgttgaagcttggtattgtcggcctggtcctgctgggcgggctggcc
atttatcttgatgctatcgttcaggagaagttttccggcaagcgctggaccattcctgcc
aaggtctatgcacgcccgctggagctgttcgtcgggcagaagctcagtcgcgacgacttt
ctcatcgagcttgatgcgctgggctatcgccgcgaaagcgtggctaatggccctggcgca
gcagcggtcaacggcaatactgtcgacctcaatacccgaggcttccagttctacgaaggc
accgacgtcgctcagcaggtacgcgtgcgtttttccggcgactccgtggccgacctctct
tcaggcaacggtgccaagctggccgtggcgcggcttgagccgctgctgatcggcggcctg
tacccgaagaatctcgaagaccggatactgatcaagcttgatcaagcaccgccttatctg
ctcgacgggctggtggcggtcgaggaccgggacttctatcaccactttggggtgtcaccc
aagtccatcgcccgggctatctgggtcaacagttctcaggggcagatgcgtcagggcggc
agtacgctgacccagcagttggtcaagaacttctacctgaccaacgagcgcagcctgacc
cgcaagctgaccgaggccatgatggcgatcctgctggagattcattacagcaagcaggaa
atcctcgaggcctatctcaatgaagtatttgtcggccaggacggtcagcgagccgttcac
ggctttggtctggccagtcagtatttcttcagccagccgctgtccgagctgaaaatccat
caggtcgcgatgctggtcgggctggtcaaggggccgtcgttctacaacccgcgccgcaac
ccggagcgagcgcttgaacgacgcaatctggtgctcgatctgttcgaacagcaaggtgtt
gcgacgccggaagtggtcgccgcagccaagaaaatgccactgggtgtgaccaagaccggc
acgcttgccgacagctcgttcccggcttttctggatctggtcaagcgccagttgcgggaa
gactatcgcgacgaagacttgactgaagaggggctgcgaatcttcaccagcttcgacccg
atcctgcagatgaagtctcaggccgccatggacgacacgttcaagaagctcgccgggcgc
aagggtgtggatgaggttcaggcaggtatggtcgtcaccaacccggaaaccggtgaggtg
caagcgctgatcggcggtcgcgaggccgggttctcgggttttaaccgtgctatcgacgcc
gtacggccgatcggttcgctggtcaaaccggctatttacctgacggcactggagcgtccg
agccagtacacgctgaccagctggattgctgacgagctgtttcaggtcaagggcgccgac
ggtcagatctggaagccgcagaattacgaccacaaatctcacggcaacatctttctgtat
caggggctggcgcattcctacaacttgtcgactgccaagctgggccttgatctgggtatc
ccgaacgttttcaaaacgctggccaaactgggcgtgacccgcgagtggcctgtgtatccg
tcgatgttgctgggggcgggtggcttgagtccgatggaagtcgccaccatgtatcaaacc
attgccagtggcgggttcaatacgccgatgcgcggcattcgcagcgtgctgaccgctgag
ggcgagccgctcaagcgttatccgttcaagatcgagcagcgtttcgatccgggggcgatt
tacctggtgcagaatgcgatgcagcgtgtaatgcgcgaaggtacgggtaaatctgtttac
aacgtgttgccgagttcgttgaatctggcgggcaagaccggcaccagtaacgactctcgc
gacagctggtttgccggtttcagccaggatctgctggctgtggtgtggatgggccgtgac
gataacggcaagaccccgtttaccggggctaccggcgccttgcaggtctggaccagcttc
atgcgcaaggccaatccgctgccgctcgacatggcaatgccggacaacgtggttcaggca
tgggtcgatgcacagactggtcagggttcggacgccagctgcccgaatgcagtgcagatg
ccgtatattcgcggcagtgaaccccagccgggcgcaacatgcggcggcgctccagcacct
gccactgaggtgatggactgggtcaaaggttggttgaactag
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