Pseudomonas coronafaciens pv. oryzae: POR16_21020
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Entry
POR16_21020 CDS
T08147
Name
(GenBank) response regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
POR16_21020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcof02022
]
POR16_21020
02035 Bacterial motility proteins [BR:
pcof02035
]
POR16_21020
Two-component system [BR:
pcof02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
POR16_21020
Bacterial motility proteins [BR:
pcof02035
]
Pilus system
Twitching motility proteins
POR16_21020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
Mg_chelatase
AAA_5
HTH_50
HTH_30
Pre_tape_measure
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QGL58643
LinkDB
All DBs
Position
4657420..4658760
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AA seq
446 aa
AA seq
DB search
MSQRQKILIVDDEPDIRELLEITLGRMKLDTRSARNVAEAHEWLAREPFDMCLTDMRLPD
GNGLELVQHIQQGYPQVPVAMITAHGNLDTAIHALKAGAFDFVTKPVDLNRLRELVNSAL
SLPSSPPPVRSVDSRLLGESPPMRSLRTQIGKLARSQAPIYISGESGSGKELVARLIHEQ
GPRNEKPFVPVNCGAIPSELMESEFFGHRKGSFSGAHEDKPGLFQAAHNGTLFLDEVADL
PLAMQVKLLRAIQEKSIRSVGGQQEQVVDVRILCATHKDLAVEVAAGRFRQDLYYRLNVI
ELRVPSLRERREDIDQLAASVLRRLAGNGAQPVARLHAQALETLKSYRFPGNVRELENML
ERAYTLCENDEIHASDLRLAECASSQEQNGPSLADIDNLEDYLESIERKLILQALEETRW
NRTAAADRLSLSFRSLRYRLKKLGLD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacggcaaaagattctgatcgtcgacgatgagccggatattcgtgaactcctg
gagatcaccctggggcgcatgaagctcgatacccgcagcgctcgcaatgttgccgaagcg
cacgaatggctggcgcgtgagccgttcgacatgtgcctgaccgacatgcgcctgcctgac
ggcaatggccttgaactggtgcagcatatacagcaaggctacccgcaggtgcccgtggca
atgatcacggctcacggcaacctcgacacggccatccatgcgctcaaggccggagctttt
gattttgtcaccaaacctgtcgacctcaaccgactgcgtgagctggtcaacagcgccctg
agcctgccttccagcccgccaccggtgcgcagtgtcgacagccgcctgttgggcgagtcg
ccaccgatgcgcagtctgcgcacgcaaatcggcaagctggcacgcagtcaggcaccgatc
tacatcagtggcgaatcgggcagcggcaaggaactggtcgcgcgactgatccatgaacag
ggtccgcgcaacgaaaaacccttcgtcccggtaaactgcggtgccattccttcagaactg
atggaaagcgaatttttcggtcatcgcaaaggcagcttcagcggcgcccacgaagacaaa
cctggcctgtttcaggcggcccataacggtacgttgtttcttgatgaggtcgccgacctg
ccgttggccatgcaggtaaagttgctgcgggcgattcaggaaaaatccatccgcagcgtc
ggcggtcagcaggagcaagtagtggatgtgcgcatcctgtgcgccactcataaagacctg
gctgtagaggtcgccgcaggcaggtttcgtcaggatctgtattaccgattgaatgtgatc
gagctgcgcgtgccctcattgcgcgagcgacgtgaggacatcgaccagttggcagccagt
gttttgcgacgactggctggcaacggcgctcagccagttgcgcgcctgcacgcgcaggcg
ctggaaacgctgaaaagctatcgattccccggtaacgtgcgcgaactggagaacatgctg
gagcgcgcatacaccttgtgtgaaaacgatgaaatccatgccagcgacctgcgcctggcc
gaatgcgccagctcccaggaacaaaatggcccgagcctggccgacatcgacaaccttgaa
gactacctggaaagcatcgagcggaaactcattctgcaagccctggaagaaacccgctgg
aaccgcactgcagcggcggacaggctcagtctgtctttcaggtcgctgcgttaccgactg
aagaagctggggctggattga
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