Pseudomonas coronafaciens pv. oryzae: POR16_21050
Help
Entry
POR16_21050 CDS
T08147
Name
(GenBank) pilus assembly protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcof02044
]
POR16_21050
02035 Bacterial motility proteins [BR:
pcof02035
]
POR16_21050
Secretion system [BR:
pcof02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
POR16_21050
Bacterial motility proteins [BR:
pcof02035
]
Pilus system
Pilus assembly proteins
POR16_21050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
QGL58649
LinkDB
All DBs
Position
complement(4665380..4668589)
Genome browser
AA seq
1069 aa
AA seq
DB search
MRIVKALRGGLKYIYGALLALYLASPVYAFTPAQVPLLSSPAVPPNLMLLVDNSGSMYNI
IWASGFDPLLDRPNIDYFSTQCISGLVTVVCPFISTISGDDTLALGDINALSIIDLSLMC
PFGGRPVFRNGNQYCLNLPDPAGNGLTRYTADYLSYLIDLVNPGFFGVRNYTNGVIPNDY
RMNVAKNVATNLVTNNTSLRIGLATFNDPNNFDLGAGGKIARIVTDLSPVTANTYQPVGV
TQAQATANINALKQAITNLNPTANTPLAETYYEITRYFRGMSPFYQSGSNYVSPIQYRCQ
KNYGVVVTDGLPTYDRTFPTDDPDAALDRTRSLPNWDLNAANDGANRFGDNEGDTLYLDD
LAKFAYDIDLRRDAVTSGGDLTGKSWDAAGFVKQNMSTYTIGFTASNQMLSDAANDTHGH
GRYFQANDSAGLTSALNLALSDIYAKVGSGAGGAANSSTLQTGTQFYQTLYDPTDWHGTV
RAFNLDQITGTLSTPVWTTDTAIVSGSTPPVFESWSTLATPKRITLDYANFSPAQQAALN
ATLPTNVTGTELIAWAKGTANAKFRTRTRLLGDIVNSSLGTAFPLQKTAADLTGDTTYTA
YLATKASSMTPSILANANDGFFNVISTSDGSRRYAYMPSTALTSLATIASTTYGAGVHKF
TVDGQVAVFDTQLSAGSSWRTVAYGGTGAGGKAFFAIKLFEGTSNTVSALWEVKAPDTSD
TNNKFNNLGYTYAKPDVARMADGTGIVVVGNGYGSFTGRASLYVLNANTGAFITEIQTPV
LNSETDNGLSSVKLRVNAQNVVQAAYAGDLKGRLWKFDMTGAAATSWKVAFGGAPMFTAP
RGAAQPITVQPFVLDHPLNGKIVYFGTGKFIEVADKQTTGLQDFYAIWDADTGAGSTVEA
NLQAQAVNGSVTSNGATYFTSTNNDVDWSVKKGWYMPLSAVAPYLGERIIYPAQTSRDRI
IFSTASVNSADPCESTGTGRVFELNAATGSMLNYQVLDTNGDNSINSSDLYAAGIGYTGI
PVVSAIVSGTADGNEVKIINNSTGDTPDRLKERGGSGNVFQRIMWRQIQ
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattgttaaggcgcttcgtggcggtctgaaatatatctacggtgcgctgctggcg
ctctatctggccagcccggtttatgccttcacgccagcacaagtgcccttgttgagctcc
ccggcagtgccgcccaatctgatgctactcgtggacaactcgggcagcatgtacaacatc
atctgggcatcggggttcgacccgttgctggatcgcccgaatatcgattacttctcgacg
caatgcataagtggtctggtcactgtggtgtgccccttcataagtactatttctggcgac
gatacactggcactgggggacatcaacgccctcagtattatcgacctgtcattgatgtgc
cctttcggcgggcgccctgtttttcgtaatggcaaccagtactgcctcaacctgccggat
cccgcagggaatggcctaactcgttacacagctgactacctgtcgtacctcattgatctg
gtcaatcctggtttctttggtgttcgcaattacaccaatggcgtcatccccaacgattac
cgcatgaacgtcgcaaagaacgtagcgaccaatctggtaaccaacaatacgtcgctgagg
atcgggcttgcgacgttcaatgatccaaacaatttcgatctgggggcgggaggcaagata
gccaggatcgttacagacctgtcccctgtgacggcgaatacctaccagcccgttggtgtt
acccaggcgcaggccaccgcaaacatcaacgctctgaaacaggctattaccaacctgaac
ccgacagccaacaccccgctggcggagacctactacgaaatcacacgatattttcgcggg
atgtcaccgttctatcaaagtggttcgaactacgtgagtccgattcagtaccgctgccaa
aaaaactacggcgtagtagtgactgatggtttgccgacttacgatcgaacctttcccacc
gatgatcctgatgctgctctggaccggactcgctcactgcccaattgggacctgaacgca
gccaatgacggtgccaaccggtttggtgataacgagggggataccctctatctggacgat
ctggccaagtttgcctacgacattgatctgcgccgggatgccgtgacttccgggggggac
ctgaccggcaaaagctgggacgccgcgggtttcgttaaacagaacatgagtacgtatacc
atcggcttcactgcgtctaatcagatgctgagcgatgccgccaatgatactcatggacat
ggcagatactttcaggccaatgacagcgcggggctgacttcagccttgaatctggcgttg
agcgacatctatgcgaaagtcggctctggcgcagggggcgcggccaactcgtcgacgctt
cagacaggtacccagttctaccagacgctttatgatccaacggattggcatggcaccgtc
agagccttcaatctggatcagattaccgggactttgagtacgccggtatggactacggat
acggccattgtcagtggctctaccccgccggtgttcgagtcgtggagcactcttgccacg
ccgaagaggattaccctggattacgcgaacttcagccctgctcaacaggcagcactgaat
gcaacgctgccaaccaatgtcaccggtacagagcttattgcctgggccaagggcactgcc
aatgcgaagtttcgaacacgcactcggctgctgggcgatattgtcaattcttcactcggt
actgcattcccgttgcaaaagactgccgctgacctgacgggtgacactacctacaccgcg
tatctggccaccaaggcaagcagcatgacccccagcattctggccaacgccaatgatggc
tttttcaatgtaatcagcaccagcgatggttcgagacgatacgcctatatgccgtctacg
gctttaacgtcactggcgaccatcgcatcgaccacctatggggctggcgtacacaaattt
accgtagatggtcaggttgcggttttcgatacacagctttctgcgggttcctcatggcgc
accgtggcttacggcggtaccggcgcggggggcaaggcattcttcgccatcaagttattc
gagggtacaagtaacactgtcagcgcgttgtgggaggtcaaagcgcccgatacgtccgac
accaacaataaattcaacaatcttggctatacctatgcgaaaccggacgttgcccggatg
gcggatggcaccggaattgtggtggtcgggaacggttatggcagcttcaccggcagggcg
tcgctttatgtactgaatgccaataccggggcattcatcaccgagatccagacccctgtt
cttaacagtgaaacagataacggtctgtcgtcggtcaaactgcgcgtcaacgctcagaat
gtggttcaggctgcatacgccggcgatttgaaagggcggttgtggaagttcgatatgact
ggggcagccgccaccagttggaaagtggcttttggcggcgcgcctatgtttaccgcgcca
cgtggggccgctcagcccattacagtccagccatttgtgctggatcaccccctcaacggc
aagatcgtctatttcgggaccggcaagttcattgaggtcgcagacaagcaaactaccgga
cttcaggacttctatgcgatatgggacgctgataccggggcgggcagcactgtagaggca
aacctgcaggcgcaagcagtcaatggcagtgtcaccagcaacggcgccacttatttcacg
tcaaccaacaatgatgtggattggtctgtcaaaaaaggctggtacatgccgctctcggct
gtggcgccgtatctgggtgagcgaatcatctatcctgcgcagaccagtcgagaccggatt
attttctcgaccgcatccgtaaactccgctgacccttgtgaaagcacaggcaccgggcgc
gtatttgaactcaatgctgccaccggcagcatgctcaactatcaggtgctcgacaccaac
ggcgataacagcatcaacagttcagacctgtatgccgccgggatagggtacacgggtatc
cctgtcgtctcggcgatcgtctcgggcacggcagacggtaatgaagtcaagatcatcaac
aattccacgggtgacacgcctgatcgtctgaaagaaagaggcggcagtggcaacgtcttc
cagcgcatcatgtggcgacaaattcaatag
DBGET
integrated database retrieval system
