Pseudomonas coronafaciens pv. oryzae: POR16_23190
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Entry
POR16_23190 CDS
T08147
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
POR16_23190 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcof02000
]
POR16_23190 (choX)
Transporters [BR:
pcof02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
POR16_23190 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
QGL59025
LinkDB
All DBs
Position
5085018..5085965
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AA seq
315 aa
AA seq
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MKGSKSLLLAATLCMPVLAQAAEPEACHTVNFSDVGWTDITVTTAVTSAVLESLGYKTKT
TMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKPYREAGTVETVRANLENAKYTLAVPQ
ELYDKGLHDFADIVKFKKELGGKIYGIEPGNDGNRLIQSMIDKNAFGLKDAGFKVVESSE
AAMLSQVDRAVKRKNDVVFLGWEPHPMNTRFKMKYLTGGDDFFGPNYGQATIYTNTRKGY
SQECSNVGQLLKNLSFTLDMESTLMGNVLDDKMKPDAAAKAWIKKNPQVLDTWLAGVTTV
DGKPGLEAAKAKLTQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttccaaatcgctgctcttggccgcaacgctatgtatgccggtgcttgctcag
gcagccgagccagaggcctgtcatacggtcaacttctccgacgtaggctggactgacatc
accgtcaccactgcggtgaccagcgccgtactcgaatcgctgggctataagaccaagacc
accatgatttccgtacccgtgacctacaagtcgctggcagacggcaagaacatggacgtt
ttcctcggcaactggatgccgaccatggaaaacgacatcaagccttaccgcgaagccggg
actgtcgaaaccgtacgcgccaacctcgaaaacgccaaatacactctggccgttccgcaa
gagctctacgacaaaggcctgcacgacttcgccgacatcgtcaaattcaagaaagaactg
ggcggcaagatctacggcatcgagcctggcaacgacggtaaccgcctgatccagagcatg
atcgacaagaacgccttcggcctgaaagacgcaggcttcaaggtcgtcgagtccagtgaa
gccgcaatgctctcgcaggtcgaccgcgcggttaaacgcaaaaacgacgttgtgttcctg
ggctgggaaccacatccgatgaacacccgcttcaagatgaaataccttacaggtggtgat
gactttttcggccccaactatggccaggcgaccatctacaccaacactcgcaaaggttac
agtcaggaatgcagcaacgtaggtcagttgctcaaaaacctgtccttcacgctggacatg
gaaagcaccctgatgggcaatgttctggacgacaagatgaagcctgacgccgctgccaag
gcgtggatcaagaaaaacccgcaagtgctcgatacctggctcgccggcgtgaccacggtt
gatggcaaacctggcctggaggcagccaaggccaagctgacccagtaa
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