Pseudomonas coronafaciens pv. oryzae: POR16_23355
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Entry
POR16_23355 CDS
T08147
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcof03021
]
POR16_23355 (rpoH)
Transcription machinery [BR:
pcof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
POR16_23355 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
IF2_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
QGL59056
LinkDB
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Position
complement(5117568..5118422)
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AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVQTVNSIPLLTPERERELAESLYYEQDLDAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDSDWTDNSTANLHQALDVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKTSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgctttagtcccgggtgcgaaccttgaggcctat
gtgcagacggtcaacagcatccccttgctgacgcccgagcgggagcgtgaactggctgag
agtctctactatgagcaggatctggacgcggcccgacagatggtcctcgcccacctgcgc
tttgtcgtgcacatcgctcgcagttattcgggttacggtctggcacaagctgacctgatc
caggaaggcaatgtcggcctgatgaaggccgtgaagcgtttcaaccctgaaatgggcgta
cgtctggtgtcctttgccgttcactggatcaaggccgaaattcacgagttcatcctgcgc
aactggcgcatcgtcaaggtcgccacgaccaaggcgcaacgcaagctgttcttcaatctg
cgcagccagaagaagcgtctggcgtggctgaataacgacgaagtgcatcgcgtcgcggaa
agcctgggtgtcgaaccgcgtgaagttcgcgaaatggaaagccgcctgacgggtcacgat
atggcctttgaccctgccgccgaagccgacgacgacagcgcttttcagtcgccagccaac
tatctggaagaccaccggtatgatccggcgcgtcagctggaagactctgactggaccgac
aattccaccgctaacctgcatcaggcgctggacgtgctcgacgagcgcagccgcgacatc
ctctaccagcgttggctggcagaagaaaaagccacgctgcacgacctggcgcagaagtac
aacgtctctgccgagcgtattcgtcagctggaaaaaagcgcgatgaacaagctgaagacg
tcgatagctgcctaa
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