Pseudomonas coronafaciens pv. oryzae: POR16_24405
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Entry
POR16_24405 CDS
T08147
Symbol
tssA
Name
(GenBank) type VI secretion system protein TssA
KO
K11902
type VI secretion system protein ImpA
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
POR16_24405 (tssA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcof02044
]
POR16_24405 (tssA)
Secretion system [BR:
pcof02044
]
Type VI secretion system
Imp/Vas secretion system core components
POR16_24405 (tssA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
GNAT_acetyltr_2
Motif
Other DBs
NCBI-ProteinID:
QGL59256
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All DBs
Position
5354493..5355590
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AA seq
365 aa
AA seq
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MSEFLNDLSLADLTAPINGGSGEDLSFSTLFDQVKEARRADPDYLTQGDWQTDLKSSDWD
QTITLAAQGLAEQSKDLMLVAWLSEALAHKYHFVGITFGLTVAERILQNFWDDLYPSLED
GVEERAARLAWLKTTLTEVVGGLPITQGQNFGLLRYDESRHVENLALQNPKAMHAAVEEG
KINAEIFQRSVVLTDSDHLRLKASEIAASLYACQQLQATADTLFGRDAPSLVTLSDILQR
AGQLTEKLLKDRGIELSPAPAAATQAAPEIAVDQSAGAAMTHTTQESASAPLRTTPTTRD
EAFTMLAGIAQFFKNTEPQSPVPYLIERAIKWGNMPLEGWLNDVIKDSNVVDSIRDVLGT
KEPKQ
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatttctcaacgacctttcgcttgccgatctgacggcacccatcaacggggga
agtggcgaggacctgagcttttccaccctgttcgatcaggtcaaggaagctcgtcgagca
gaccccgactaccttacccaaggtgactggcaaaccgatctcaagtcctctgactgggat
cagaccatcacgttggccgcgcagggcctcgccgaacaaagcaaggacctgatgctcgtc
gcctggctcagtgaagccctggcgcacaaataccactttgtcggcatcaccttcggcctg
accgtggccgaacggatcctgcaaaatttctgggacgacctatacccgtctctggaagac
ggcgtggaagaacgcgccgcccgtctggcctggctgaaaaccacactcaccgaagtcgtg
ggcgggttgccgatcacgcaggggcagaactttggcctgctgcgctacgacgagtcacgc
cacgtcgaaaacctcgccctgcaaaaccccaaggccatgcacgccgctgttgaagaaggc
aagatcaacgccgaaatcttccagcgctcggtcgtgctgaccgactcggaccacctgcgc
ctcaaggccagcgaaatcgccgccagcctgtacgcctgccagcagctccaggccaccgcc
gacaccctgttcggccgcgacgcgccgagccttgtcaccctcagcgacatcctgcaacgc
gccgggcaactgactgaaaagctgctcaaggaccgtggcatagaactgagcccggccccc
gctgccgcgacgcaggccgcccccgaaatcgccgtcgaccaatccgcaggtgccgcgatg
acccacaccacccaggaaagcgcctccgcaccactgcgcaccacaccgaccacccgcgac
gaagccttcaccatgctcgccggcatcgcgcagttcttcaaaaacaccgagccgcaaagc
cccgtcccatacctgatcgagcgcgccatcaagtggggcaacatgccgctggaaggctgg
ctcaacgacgttattaaagacagcaacgtcgtggacagcattcgcgatgtgctgggtacg
aaagagccgaagcagtaa
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