Pseudomonas coronafaciens pv. oryzae: POR16_25075
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Entry
POR16_25075 CDS
T08147
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02020
Two-component system
pcof02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
POR16_25075
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
POR16_25075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcof02035
]
POR16_25075
Bacterial motility proteins [BR:
pcof02035
]
Flagellar system
Chemotaxis proteins
MCPs
POR16_25075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBM
MCPsignal
HAMP
4HB_MCP_1
DUF948
Motif
Other DBs
NCBI-ProteinID:
QGL59367
LinkDB
All DBs
Position
complement(5498445..5500367)
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AA seq
640 aa
AA seq
DB search
MNSRFANISVNMKLALGFGTVLFFTAVLAFVGWTSLDKLIYRTDRIGDITQLGDNLTSLR
VARLQYMLTDGDETAAQNMQSKLDVFKTQQQSLLKRFSNPLNLKPLGELADVTRDYEASL
TRMRAAYQAGSKVRTEMAVNAAAAAQTIESLNTAVIQTDPSEPTRFDQILLVNTARQDLL
LVGNEVRSYTVKPDEKSEKAVFQQLDTAIGHLDALKSTFDATNREQIVRLETALRSYRGS
VEAFKVTTQTAGAVRKDLTAQGAAIVQLGEQLYGIQMQLAKEDAARARNLQLGCVLLVML
LGILAAVVITRQITRPLRDTLAIVERIASGDLTHTDAITRRDELGVLQQGIQRMGTTLRE
LISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMQEMSATVHEVARNAEQ
ASVAASDADKQAREGDRVVGEAIDQIERLAAEVARSSDAMNVLEQESDKIGKVMDVIKAV
AEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTEEIEGLVAALQNGTRQV
SGIMLGSRTLTDSSVELTRKAGTSLESITRTVSSIQAMNQQIAAAAEQQSSVADEISRSI
VNVRDVSEQTAEASEETAASSVELARLGGQLQMMVSHFRV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagatttgccaatatcagcgtcaacatgaagttggctctgggctttgggacc
gttcttttttttactgccgtcctcgctttcgtcggctggaccagcctcgacaaactcatc
taccgcaccgacagaatcggtgacatcactcaacttggggataacctgacctcgttgcgg
gtcgcgcgtctgcaatacatgctcaccgatggcgatgaaaccgccgcccagaacatgcag
agcaaactggacgttttcaagacgcaacaacaatcgcttctgaaaagattcagcaacccg
ctcaacctcaaacctctgggcgagctggctgatgtcacacgcgattacgaagcctcgctc
acccgcatgcgtgcggcttatcaggccggttccaaggttcggaccgagatggcagtcaat
gcggcagctgcagcgcagacgattgaatcgctgaacaccgccgtgatacagacggaccct
tcggagccgacgcgtttcgatcagatcctgttggttaatacggcccggcaggacctgctt
ctggtgggtaacgaagttcgcagctataccgtgaaaccggatgagaagtctgagaaagcg
gtcttccagcaactggatactgcgatcggccacctggacgcactcaaatccacttttgac
gcgaccaatcgcgagcagatagtacggctggaaacggccctgcgcagttatcgcggctcg
gtcgaagcgttcaaggtgacgacccagacagccggcgcggtccgtaaagacctgaccgct
caaggcgcggccatcgtccagcttggcgagcagctgtatggcattcagatgcagcttgcc
aaggaggatgccgcacgagcgcggaacctgcagctgggctgcgtattgctggttatgctg
ctgggcattctcgctgctgtcgtgatcacgcgtcagatcacccgtccgttgcgcgatacg
ctggcaattgtcgagcgcattgcttccggcgacctgacacacaccgacgccatcacccga
cgcgatgagctgggcgtgttgcaacagggcattcagcgcatgggcaccaccctgcgcgag
ctgatttccggtattcgcgatggcgtcacgcagattgccagcgcggccgaggaactgtcg
gcggtcaccgagcagaccagcgccggggtcaatagccagaaggtggaaaccgatcaggtc
gccacagcaatgcaagagatgtccgcgaccgtccatgaagtggcacgcaatgccgagcag
gcttccgtagccgcctctgatgccgacaagcaggctcgcgagggtgacagggtggtcggc
gaagccattgaccagatcgaacgactggccgctgaagtggctcgttcatccgatgccatg
aatgtcctggagcaggaaagcgacaagatcggcaaggtcatggacgtgatcaaggcggtt
gccgagcagaccaacctgcttgcgctcaatgcggctatcgaggctgcgcgtgccggcgag
gcgggtcgtggttttgctgtagttgccgatgaagttcgcggtcttgctcagcgtacccag
cagtctaccgaggagatcgaaggcctggtcgctgccctgcagaacggcacccgccaggtg
tcgggcatcatgctgggcagccgcacgttgaccgacagcagtgtcgagctgacccgcaag
gctggtacttcactggaaagcatcaccaggaccgtgtcgagcattcaggcgatgaaccag
cagatcgcggcagcggccgagcagcaaagctcggttgcagacgaaatcagccgcagcatc
gtcaacgtacgcgacgtatccgaacagacagcagaagccagcgaagaaacagccgcgtcc
agcgttgaactggcccgcctgggcggccagttgcagatgatggtcagccacttccgcgtt
tga
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