Segatella copri: LK433_00190
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Entry
LK433_00190 CDS
T07933
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_00190
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_00190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
UEA43056
LinkDB
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Position
complement(53664..55469)
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AA seq
601 aa
AA seq
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MKINKLFILAALSLSLVSCSDLFEPAQENNRSLDEIYEEPTYAQGLLGYAYAVLPYNTKS
VTDVATDDAVSNDLSNSYLKMATGSWAANNDPMSKWTSCRASIQYLNIFLQEVDKVDWAK
DKGAQQMFCESRKGEAYALRALNMYYLLMNHGGWTEDGQLLGVPNLTKPEDTSSDFNQPR
ATFQACLDQIYSDLDQAEQLLPLDYNDLTKSDPVPEKYTAMGVNNYQDYNRVLGSLMRGR
VSGRIAKAIRAQVSLLAASPAFNKGTNVDYKRAADDAASLLDLIGGVSGLSETGNSWYAQ
TNEINNLQSGACPKEIIWRGNKTNGADDWDLGLNQEADNFPPSLYGKGRINPTQNLVDAF
PAANGYPITDERSEYDDLDPYSNRDPRLNLYIIYNGSKYKGATINTDITTANNDNGLNKI
GNSTRTGYYMKKLLREDCNPNPNAKNAQYHYPVYIRYTEIFLDYAEAANEAWGPKGNGTH
AYSAYDVIKAIRHRAGITDDSYLDECANDQVKMRELIRNERRIELCFENKRFNDLRRWKA
PINEAVHGVEISTEAGIPQFKDITVEERKYDDYMYYGPVPQTEILKWDQLKQNAGWKITN
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaataagttatttatattagctgcattgtcactctcgttggtgtcttgctca
gatctctttgagcctgcacaggaaaacaaccgtagcttggacgagatttacgaagagcct
acttatgctcagggacttctcggctatgcttatgccgtgcttccttataataccaaaagt
gtaactgatgtggcaaccgatgatgctgtaagcaatgatttgtctaacagctacctgaaa
atggctactggttcttgggctgccaataatgaccctatgagcaagtggactagctgtcgt
gctagcatccagtacttgaacatcttccttcaggaagtggacaaggtagactgggctaag
gacaagggtgcgcagcagatgttctgtgagagccgtaagggtgaggcttatgccttgaga
gctctcaatatgtattatctcttgatgaaccatggtggttggactgaggatggtcagctc
ctgggtgtgccaaacttgacaaagccagaggatacttcttctgatttcaatcagccacgt
gccacattccaagcttgcttggatcaaatctatagcgacttggaccaggctgagcagttg
ctgcctttggactacaatgatttgactaagtcagatcctgtgccagaaaaatacactgct
atgggtgtgaacaactatcaggactataaccgtgtattgggttctctgatgcgtggtcgt
gtgagcggtcgtatcgccaaggctatccgtgcacaggtttctctccttgctgccagccct
gcttttaataagggtaccaatgtggattataagcgtgctgctgatgatgcagccagcttg
ctcgatttgataggtggcgtaagcggcttgtctgaaacaggtaattcttggtatgctcag
actaatgagattaataatttgcagtctggtgcatgccctaaggagattatctggcgtggt
aataagactaatggtgcagatgattgggacctcggtttgaaccaggaggctgataacttc
cctccatctctctatggtaagggacgtatcaatcctacccagaatttggtagatgctttc
cctgctgccaatggttatcctatcacagatgagcgcagtgagtatgatgacttggatcct
tatagtaatcgtgatccacgcttgaatctctacattatctataatggcagcaagtataag
ggtgcaaccatcaataccgacatcaccactgccaacaatgacaatggactgaataagatt
ggtaactctacacgtactggttactatatgaagaagcttcttcgtgaggattgtaatcct
aatccaaatgccaagaacgcacagtatcactatcctgtgtatatccgctataccgagatc
ttcttggattatgctgaggctgccaatgaggcttggggacctaagggcaatggcacacat
gcttattctgcatacgatgtgatcaaggctatccgtcatcgtgcaggcatcacagatgat
tcttatcttgatgagtgcgctaacgaccaggttaagatgcgtgagttgattcgcaatgag
cgtcgtattgagctctgcttcgagaacaagcgcttcaatgacctccgccgctggaaggct
cctatcaatgaggctgttcatggcgtggagatttctacagaggctggtattccacagttc
aaggatatcacagtagaggaaagaaaatacgacgactatatgtattacggtcctgtgcca
cagactgaaatcctcaagtgggatcagctgaagcagaatgcaggatggaaaattacaaac
gactaa
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