Segatella copri: LK433_00375
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Entry
LK433_00375 CDS
T07933
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcoi
Segatella copri
Pathway
pcoi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LK433_00375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoi03021
]
LK433_00375
03400 DNA repair and recombination proteins [BR:
pcoi03400
]
LK433_00375
Enzymes [BR:
pcoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LK433_00375
Transcription machinery [BR:
pcoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LK433_00375
DNA repair and recombination proteins [BR:
pcoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LK433_00375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UEA43089
LinkDB
All DBs
Position
complement(105673..106668)
Genome browser
AA seq
331 aa
AA seq
DB search
MAILAFQKPDKVVMLEADNKFGKFEFRPLEPGFGVTIGNALRRILLSSLEGYAVNTIRIA
GVEHEFSSVPGVKEDVTNIILNLKQVRFKQVVEEFENEKVSITVENSTEFKAGDIGKYLT
GFEVLNPDLVICHLDAKASMQIDLTINKGRGYVPADENRQFCTDVNVLPIDSIYTPIRNV
KYAVEPYRVEQKTDYDKLVLEITTDGSISPKDALKEAAKILIYHFMLFSDEKITLETQDQ
ESNQEFDEEVLHMRQLLKTRLVDMNLSVRALNCLKAADVETLGDLVQFNKTDLLKFRNFG
KKSLSELDDLLESLNLSFGTDISKYKLDKES
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacctgataaagtagtaatgttagaggctgataacaag
ttcggaaagtttgaattccgtcctttggagcctggcttcggtgttaccattggtaacgcc
ttgcgccgcattctcctttcatcattggagggttatgctgttaacacgatccgcattgcg
ggtgttgagcatgagttctcttcagttcctggtgtaaaggaagatgttactaacattatc
ttgaatctcaaacaagttcgattcaagcaagtagtagaagaattcgagaatgagaaagtt
agtatcaccgttgagaattctacagaattcaaagcaggtgatatcggtaagtatctgact
ggatttgaagtgttaaaccctgatttggtgatttgtcatttagatgccaaagcttcgatg
cagatcgatttgactattaataagggacgcggttatgttcctgctgatgagaatcgtcaa
ttctgcactgacgttaacgttctcccaatcgattccatctacacccctattcgtaatgta
aagtacgctgtagaaccatatcgtgttgagcaaaagaccgactatgataagctcgtactt
gaaattacaacagatggttccattagtccaaaggatgcactgaaagaggctgcgaagatc
cttatttatcacttcatgctcttctctgatgagaagattactcttgagactcaggatcag
gagagcaatcaggagtttgatgaagaggttcttcatatgcgccagttgcttaagactcgt
ctcgtagacatgaatcttagtgttcgtgccctcaactgcttgaaggcagctgatgttgag
actcttggtgatttggttcagtttaacaagactgacctcttgaagttccgcaactttggt
aagaaatcgctctcagagcttgatgatttgctcgagagtctgaatctgtcttttggaact
gatatttcaaagtataaattagacaaggaatcttaa
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