Segatella copri: LK433_00970
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Entry
LK433_00970 CDS
T07933
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pcoi
Segatella copri
Pathway
pcoi00750
Vitamin B6 metabolism
pcoi01100
Metabolic pathways
pcoi01240
Biosynthesis of cofactors
Module
pcoi_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
LK433_00970 (pdxS)
Enzymes [BR:
pcoi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
LK433_00970 (pdxS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
TetR_C_27
NanE
IMPDH
His_biosynth
IGPS
Motif
Other DBs
NCBI-ProteinID:
UEA43193
LinkDB
All DBs
Position
complement(220317..221192)
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AA seq
291 aa
AA seq
DB search
MAENRQELNRNLAQMLKGGVIMDVTTPEQAKIAEAAGACAVMALERIPADIRAAGGVSRM
SDPKMIKGIQEAVSIPVMAKCRIGHFAEAQILQAIEIDYIDESEVLSPADNVYHIDKTQF
DVPFVCGAKNLGEALRRIAEGATMIRTKGEPGTGDVVQAVTHMRMMQSEIRRLVSMSEDE
LYEAAKQLQAPYDLVKYVHENGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
GNPAKRAQAIVKAVTNYNDPKMLAELSEDLGEAMVGINEQEIALLMAERGK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatagacaagaattgaaccgcaacttggctcagatgctcaagggtggtgtg
attatggacgtaacaactccagaacaggcaaaaatcgcagaggcagcaggtgcatgcgca
gtaatggctttggaacgtattccagctgacatccgtgcagcaggtggtgtttcacgtatg
agcgaccctaagatgatcaagggtattcaggaggctgtttctatccctgtaatggctaag
tgccgcatcggtcacttcgctgaggctcagattcttcaggctatcgaaatcgactatatt
gacgagagcgaggtgctctctccagctgataatgtttatcacattgacaagactcagttt
gacgtaccattcgtttgtggtgccaagaacctgggtgaggcgctccgccgtattgctgag
ggtgctacgatgatccgtaccaagggtgagccaggaacaggtgatgtggttcaggctgtt
acccacatgcgtatgatgcagagcgaaatccgccgcctggtttctatgagcgaggatgaa
ctttacgaggcagccaagcagttgcaggctccttacgacctggtgaagtatgttcacgag
aacggcaagttgccagtggttaacttcgctgccggtggtgtggctactccagctgatgct
gccctgatgatgcagctcggtgccgagggtgtattcgtaggctctggaatcttcaagagc
ggtaacccagctaagcgtgcccaggctatcgtgaaggcagttaccaactacaacgaccct
aagatgctggctgagttgagcgaggacctcggtgaggcaatggtaggtatcaatgagcag
gagatagctttgctcatggctgaaagaggtaagtaa
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