Segatella copri: LK433_01020
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Entry
LK433_01020 CDS
T07933
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_01020
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
UEA43202
LinkDB
All DBs
Position
complement(234662..236188)
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AA seq
508 aa
AA seq
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MNIKNIKTYILSGILALSMSSCLDKYPEDSIRMDQAINTVGDIDKLVYGIYDSFKSSALY
SGNLTILPDLQADFVYCVKGYSNAYGDIYRWKDIKATNTDIEAVYADLYGVINNANFLLD
NVDKVKANTNSDKELDKLEQCEGEAYFARALAYSELIKCFCKAYDSDEQAEKELGVVLTE
HYYGNEPQKRASLKESYEFVLRDLDKATGYLKVDEDFTGSLYNEIYFNEYTCHALRARVS
LYMHKYDDAIKYASKVIGSKYYTLEKASSNTYSNQVNDYKYIWTYGDSREAIWKVGFTVN
SYGGALGTIFDNYNFVTYRPDYVPETWVINSFDSNDLRAAAIFTTRVTGYEHGLQWPLLS
KYFGDAEFLNNNILHVHQPMVFRLSEQYLIRAEAYAMKGDYSKAGKDISTLRTARYSSYG
GNTSMSESNAMKIIEAERVKELYMEGFRLNDLKRWHKGFERKAADQPAANFVQSSLKVEK
DDPLFVWPIPQHELEAPGSEIQPNESNK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaaaaatataaagacatacatcctgtcgggaatcctagccctctcgatgtct
tcctgtcttgataagtatccagaggattctatccgcatggaccaggctatcaacacggtg
ggcgacatagacaagctggtgtacggtatctacgacagtttcaagagcagcgccctctat
tcgggcaatctgacaatcctgccagatctgcaggcagacttcgtgtactgcgtgaagggc
tactctaatgcctatggcgatatctaccgttggaaagatatcaaggctaccaacaccgac
atcgaggcggtatatgccgacctttatggtgttatcaacaatgccaacttcctgctcgac
aatgtagataaggtaaaggcaaacaccaacagtgataaggagctcgacaagttggagcag
tgtgagggcgaggcttatttcgctcgtgccctggcttactcagagttgatcaagtgtttc
tgcaaggcttacgatagcgatgagcaggcagagaaggaactcggcgtggtactcacagag
cactattacggcaatgagccacagaagagagccagtctgaaggaatcatacgaattcgta
ttgagagaccttgacaaggctactgggtatctgaaggtagacgaagacttcacaggaagt
ctctacaacgagatttacttcaacgagtatacctgtcatgccttgcgtgcgcgcgtatcc
ttatatatgcataagtatgatgatgccatcaagtatgcatctaaggtaatcggcagtaag
tattatacattggagaaggcttcttccaacacctattcaaaccaggtgaacgattataag
tatatctggacctatggtgattcgcgtgaggctatctggaaggtaggcttcaccgtgaac
agctatggcggtgcactgggtaccatcttcgataactacaacttcgtaacttatcgccct
gactatgtgcctgagacatgggtcatcaactcattcgacagcaatgacctccgtgctgca
gccatcttcacaacccgtgtaacaggttatgagcacggtttgcagtggcctttgctgagc
aagtatttcggcgatgcagaattcctgaacaacaatatcctgcatgttcatcagccaatg
gtattccgtctgtcagagcagtatctgatacgtgctgaggcttacgccatgaagggggac
tatagtaaggcaggtaaggacatctctaccttgcgtacagcccgctactcatcttatggt
ggtaacacctcgatgagcgagagcaacgccatgaagataatcgaggcagagcgcgtgaag
gaactctatatggaaggcttccgtctgaacgacctcaagcgctggcacaagggatttgag
cgtaaggctgccgaccagcctgctgccaacttcgtgcagagcagtctgaaggttgaaaag
gatgaccctctctttgtctggccaattcctcagcatgagcttgaggcaccaggttctgag
attcagcctaatgaaagtaacaaataa
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