Segatella copri: LK433_01050
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Entry
LK433_01050 CDS
T07933
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_01050
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_01050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
UEA44261
LinkDB
All DBs
Position
complement(248156..249841)
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AA seq
561 aa
AA seq
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MMMGTAVLTGTTSCVSDLDQYPHTETTSKDVYTSLANYEAVLGKIYAAMVTSGQGKGGDN
KDMESVLNKGAGFDYMRMFINMQECGTDEFASTWLTGEQTTGLTYLSWDANDAWVSDMYY
RIYYNIALCNEFLRNANSANFSGADAEKMKEYKAEVRFMRALFYYHALDFYRNIPMVTEN
DPVGSYIPPRYTPQQTFDYIESELKDCVGDMLPASTCPYGQASQGAAYTLLAKLYLNSEV
YTGVDKYAECKEACEKVMDMGYSLESDYSKLFNADNDKRTNEIIFALPVSAEHIVSWGSS
TYLVCGQVSLSNANQNVADYGVTAGWSEFRLRPEFVDKFTQTDIDGGDDGDKRCKFFTNG
QSKDISSMTTETAGYLSEKWSNLKDDGITAASNTADAGVETDFPLFRLADVYLMYAECVV
RCKDANDKPLDWDPWNGGININDQTVIESRKKGAIYWINLLRERAYGKDENGNPRGQVWK
ENFSSKEAFLQFILDERARELYHEGYRRTDLIRYGQFTTNKYIWQWKGGTHDGQAVDSKY
NIYPIPNTELTANPNLHNDNY
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgggaacagcggtgctgacaggcacaaccagctgtgtttccgatctcgaccaa
tatcctcatacagagacaacctctaaggatgtttatacctcgcttgccaattatgaggct
gtgctgggtaagatttatgctgccatggtgaccagtggtcagggcaagggcggcgataat
aaggatatggaatccgtattgaacaaaggagcaggtttcgactacatgcgtatgtttatc
aatatgcaggagtgtggtaccgatgaatttgcctctacctggctgactggtgagcagact
acggggcttacttatctttcctgggatgccaacgatgcgtgggtatcagatatgtattat
cgtatctactacaacatcgccctctgcaacgagttcctgcgcaatgccaacagtgccaat
ttctcgggtgctgatgctgagaagatgaaggagtataaggcagaagtccgttttatgcgc
gctctgttctattaccatgccctcgatttctatcgcaacattccgatggtgacagagaat
gaccctgttggcagctacattcctcctcgttatactcctcagcagacattcgattatatt
gagagcgagttgaaggattgtgtaggtgatatgcttcctgcttctacctgtccttacggt
caggcttctcagggtgctgcctataccttgcttgccaagctttatctgaacagcgaggtt
tatactggcgttgacaaatatgctgagtgcaaggaggcttgtgagaaggtgatggatatg
ggctactctttggagtctgattacagcaagctcttcaatgctgataacgacaaacgtacc
aacgagattatcttcgccttgccggtaagtgctgagcatattgtaagctggggttcttct
acctatctggtttgcggacaggtgagtctgtcgaatgctaaccagaatgtagccgattat
ggtgtaactgccggttggagtgaattccgtcttcgtcctgagttcgtggataagtttacc
cagaccgatattgatggcggcgacgacggtgacaagcgttgcaagttcttcaccaatggt
cagagcaaggatatttccagcatgactacagaaaccgccggttatctttctgagaagtgg
agcaacctgaaggatgatggcattactgcagcatctaatactgccgatgcaggtgtagaa
accgatttccctctcttccgtttggcagatgtctatctgatgtatgccgagtgcgtggtt
cgttgtaaagatgctaatgataaaccactggattgggatccttggaatggaggtatcaat
attaacgatcaaactgtaattgaaagccgtaagaagggcgctatctattggattaacctt
ctccgcgagcgtgcatatggaaaagatgaaaatggaaatcctagaggacaagtatggaaa
gagaacttctcatcaaaagaagccttcctccagttcatcctcgatgagcgtgcccgtgag
ctttatcatgaaggttatcgccgtaccgacctgattcgctatggtcagttcacaaccaac
aagtacatctggcagtggaagggtggaactcacgacggacaggcagtggatagcaagtac
aacatctatccaatccctaacaccgagcttaccgccaatccaaatcttcataacgacaac
tattaa
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