Segatella copri: LK433_01530
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Entry
LK433_01530 CDS
T07933
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_01530
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_01530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
UEA43292
LinkDB
All DBs
Position
371012..373090
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AA seq
692 aa
AA seq
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MKLKYILMAGLACATFASCNDYLDVDTPSKYDDKYVFGTETEINRALNGVYAQLLNSNLY
GENFLTNFCFNSDVDFSTNSSETPASGAFRRFDCTSDASQLKKTWDAAYMGIEYANNFIY
QLENSPVYKAGNANCEQMLGEAKVIRAMFYNDLVDLWGDVPFTFTPTSEKKDYVTPIVSR
DEIRTKLIEDLREAAPKMSYARKLDNTIEHVSKEACWAMIARLALSAGGYSLRPDKQDAT
NHGVMQRPENYKEFYTIARNYADSVIKSNTHHLTKSYRNVFIDECNFVVDNSDDPIFEIP
FTKENSGSIGYIQGPAASLSSGYSIAPNVWGETKGSAQVSAFYGYSFNEKDLRRDYVIGM
WSYSNQGDTLCVPAIRADYTLYNNKWSKLWSNSGNFTNYSGGNTGINYPYLRYADVLLMF
AEADNELNDGPTDAAKEALKTVRRRAFESTDWSKEVDAYVDSVSQAGVGERYNTAKKAFL
RAVLNERKWEFAGENMRWKDLVRNNMYSEVLYYTFLRYYGVGENAGGTSQYLDAVEMYDF
GVEAGRYNDLPVDLYYRRIANPKNTSIFPNTAMEILEIANPYNTLERKPIDPEDITNDEY
KWQKKENNFGWWSEGDGTPTNQCLYSLYGFMRGDAQGQPALVQNNGQLSPIGSANAEMTS
DKLPVVRYILPIPNAAIQRSGGTYKNYYGYAN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaatatatattaatggcgggattggcttgcgccacatttgcatcttgtaac
gattatcttgatgtagataccccgtctaagtacgatgacaaatatgtcttcggaacagaa
acagaaattaatcgtgcgctcaacggcgtatatgcgcagttgctcaacagcaatttgtat
ggtgagaatttcctgaccaatttctgctttaacagtgacgttgatttttcaaccaactca
tcagaaactccagcaagtggtgctttccgtcgttttgactgtacaagtgatgccagccag
ctcaagaagacctgggatgctgcctatatgggtattgagtatgccaacaacttcatctac
cagttagagaacagtcctgtttataaagcaggcaatgctaactgcgagcagatgctagga
gaagctaaggtgattcgtgccatgttctacaacgacctggtagacttgtggggcgatgtt
ccatttaccttcactcctacttcagaaaagaaggattacgtaactcctattgtcagccgt
gacgagattcgcacaaagttgatagaagatttgcgtgaggctgctcctaagatgagctat
gcccgcaagcttgacaataccatcgagcatgtttccaaggaagcatgttgggctatgatt
gctcgtttggctctttctgcaggaggctactctttgcgtcctgacaagcaagatgcaaca
aatcatggtgtgatgcagcgccctgaaaactacaaggagttctatacaattgccagaaac
tatgcagactctgttatcaagtcaaatacccatcatttgacaaagtcatacagaaatgta
ttcatcgacgaatgtaactttgttgtagacaattcagacgacccaatctttgagattcct
tttaccaaggaaaactcaggctctatcggttatatacaaggtccagcagccagtttaagt
tccggttattccattgctccaaacgtatggggtgaaaccaagggaagtgctcaggtaagt
gcattctatggctactctttcaacgagaaagacctgcgccgtgattacgttattggtatg
tggagttattctaaccaaggtgataccctctgtgttccagctatcagagccgattatact
ctgtataacaacaagtggtctaaactctggtcaaacagcggaaacttcaccaactatagt
ggcggtaacaccggtatcaattacccttaccttcgctacgccgatgttctactgatgttt
gctgaagcagacaatgaactgaacgatggtcctactgatgcagccaaggaagccctcaag
actgttcgtcgccgtgcttttgaatcaacagactggagtaaggaagttgatgcatacgta
gattctgtaagccaggctggtgttggtgaaagatacaatacagccaagaaggcattcttg
cgtgcggtattgaatgagcgcaaatgggaattcgccggtgagaacatgcgctggaaggac
ctggttcgcaacaacatgtactcagaggttctttactacactttcctccgctattatggt
gttggagaaaatgcaggtggtaccagccaatatctcgatgctgttgagatgtacgacttc
ggcgtagaagctggcagatacaatgatctccctgtagacttgtattaccgccgcatagca
aacccaaagaatacttccatcttccctaacacagcgatggaaattctggaaattgccaat
ccatataatacgcttgagcgtaaaccaattgaccctgaagacatcacaaacgatgaatac
aagtggcagaaaaaggaaaataactttggatggtggagcgaaggcgatggtactccaact
aaccagtgcctctactctctgtatggcttcatgcgtggtgacgcacaaggacagcctgca
ttggtacagaacaatggtcagctgagcccaatcggttctgccaacgcagaaatgacatca
gacaaactgcctgttgtacgttacatcctacctattccaaatgccgcaatccagcgtagt
ggtggcacttacaagaattattatggttacgctaattaa
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