Segatella copri: LK433_01595
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Entry
LK433_01595 CDS
T07933
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcoi
Segatella copri
Pathway
pcoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LK433_01595 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoi03019
]
LK433_01595 (pnp)
03016 Transfer RNA biogenesis [BR:
pcoi03016
]
LK433_01595 (pnp)
Enzymes [BR:
pcoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LK433_01595 (pnp)
Messenger RNA biogenesis [BR:
pcoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LK433_01595 (pnp)
Transfer RNA biogenesis [BR:
pcoi03016
]
Prokaryotic type
tRNA degradation factors
LK433_01595 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
Mer2
Ribosomal_L32p
MnmE_helical
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UEA43301
LinkDB
All DBs
Position
complement(389028..391346)
Genome browser
AA seq
772 aa
AA seq
DB search
MNVITKSVQLPDGRTITIETGKVAKQADGAAVLRMGNTVLLATVCAAKDAVPGTDFMPLQ
VDYREQYSAAGRFPGGFTKREGKASDEEILTSRLVDRALRPLFPSNYHAEVYVQVMLLSA
DGVDQPDALAGFAASAAMACSDIPFEYYISEVRVARINGEYVVNPTFQQMEEADMDIMVG
ATKDNIMMVEGEMKEVSEQDLIGALKVAAEAIKPMCELQYELAKEKGTDVKREYDHEIND
EELREQIKSELYKPAYDINHQALEKHARQDAFDKVLADFLEKYDAAHTDLSEEDLEEKHA
EATRYYDDVMRDAMRRCILDEGLRLDGRATTDIRPIWCEVSPLPMPHGSAIFQRGETMSL
STCTLGTKMDEKLIDGVLEKSYQRFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRGL
KGQIPTDFPYTVRLVSQILESNGSSSMATVCAGTLALMDAGVPMKKPVSGIAMGLIKNPG
EDKYAILSDILGDEDHLGDMDFKTTGTRDGLTATQMDIKCDGLSFEILEEALMQAKAGRE
HILNCMMETISEPRAEMKPQVPRIVAFDIPKEFIGAVIGPGGKIIQQMQEDTGATITIEE
TDGQGHVQVSAPNKDSIDAALAKIKAIVAVPEVGEVYEGTVRSIMPYGCFVEILPGKDGL
LHISEIDWKRLETVEEAGIKEGDKIKVKLMEIDPKTGKYKLSHRVLMEKPEGYVERERRP
RPERGERRGRRDDRHEGRGERPARQPRRYEHRNDEQAPKEFNDSLDHNNDVE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattacaaaaagtgttcagttgcctgatggaagaaccatcacaattgagacc
ggaaaagttgcaaaacaggctgatggtgctgcggttctccgcatgggtaacacagtgctt
ctcgcaactgtttgtgcagcaaaggatgccgttccgggtacagattttatgcctttgcaa
gtagattatcgtgagcagtacagtgctgcaggtcgtttccctggtggtttcaccaagcgc
gaaggcaaagccagcgatgaggaaatccttacctctcgtcttgtggaccgtgctttgcgt
ccacttttcccttctaactaccatgcagaagtttacgtacaggtaatgttgctctcagcc
gatggtgttgaccagccagatgccctcgcaggtttcgctgcttcagctgccatggcttgt
tcagatattcctttcgagtactatatctctgaggttcgtgtagctcgtatcaatggtgag
tatgttgtaaaccctacattccagcagatggaagaggcagacatggatatcatggttggt
gctaccaaggacaatatcatgatggtagaaggtgaaatgaaggaagtttctgagcaggat
cttattggtgccctcaaggtggctgctgaggctatcaagcctatgtgcgaacttcagtat
gagttggctaaggagaagggtactgacgtgaagcgtgagtacgaccatgagatcaacgat
gaggaactccgtgagcagattaagtctgagctttacaagccagcttatgatatcaaccac
caggctttggagaagcatgcacgtcaggatgctttcgacaaggttttggctgatttcctc
gagaagtatgacgctgctcataccgatctttctgaggaagacttggaggagaaacacgct
gaggctacccgttactatgatgacgtaatgcgcgatgctatgcgccgttgcatcctcgat
gagggcttgcgccttgatggtcgtgctactacagatatccgtcctatctggtgcgaggta
tctccactcccaatgcctcacggaagcgctatcttccagcgtggtgagactatgtctctc
tctacatgtacgctcggtaccaagatggacgagaagcttatcgacggtgtgcttgagaag
agctaccagcgcttcctccttcactataacttccctccattctcaacaggtgaggctaag
gctcagcgcggtgtaggccgtcgtgagattggtcacggtcacttggcatggcgtggtttg
aagggccagattcctactgacttcccttacacagtacgtttggtaagccagatcttggag
tctaacggttcttcttctatggctactgtttgtgccggtactctcgccctgatggatgca
ggtgttcctatgaagaagccagtttctggtatcgctatgggtcttatcaagaacccaggt
gaggacaagtacgctatccttagtgatatcctcggtgatgaggaccacttgggtgatatg
gacttcaagaccacaggtacccgcgatggtttgaccgctacacagatggatatcaagtgc
gatggtttgagcttcgagattcttgaggaggctttgatgcaggctaaggctggtcgtgag
cacatcctcaactgcatgatggagacaatctctgagccacgtgctgagatgaagccacag
gttccacgtatcgtagcattcgatatccctaaggagttcatcggtgctgttatcggccct
ggtggcaagattatccagcagatgcaggaggatactggtgcgacaatcactatcgaggag
actgatggtcagggtcacgtccaggtatctgctcctaacaaggattctatcgatgcagct
ttggctaagattaaggctatcgtagctgttcctgaggttggtgaggtttacgagggtact
gttcgctctatcatgccttacggttgcttcgtagagattctccctggtaaggatggtttg
ctccacatctctgagattgattggaagcgtcttgagacagttgaagaggctggcatcaag
gaaggcgacaagatcaaggtgaagttgatggagattgatcctaagactggcaagtacaaa
ctttctcatcgtgtgttgatggagaagccagagggttatgtagagcgtgagcgtcgtcca
cgtcctgagcgcggtgagcgtcgcggtcgtcgtgatgatcgtcatgaaggtcgtggtgag
cgtccagctcgtcagccacgtcgttacgagcatcgtaatgatgagcaggctcctaaggag
ttcaacgactctttggatcacaacaatgatgtagaataa
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