Segatella copri: LK433_01615
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Entry
LK433_01615 CDS
T07933
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcoi03032
]
LK433_01615 (topA)
03400 DNA repair and recombination proteins [BR:
pcoi03400
]
LK433_01615 (topA)
Enzymes [BR:
pcoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LK433_01615 (topA)
DNA replication proteins [BR:
pcoi03032
]
Prokaryotic type
DNA Topoisomerases
LK433_01615 (topA)
DNA repair and recombination proteins [BR:
pcoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LK433_01615 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
UEA43305
LinkDB
All DBs
Position
395129..397459
Genome browser
AA seq
776 aa
AA seq
DB search
MQENLVIVESPAKAKKIEEFLGKDYKVMSSYGHIRDLKKKELSINEKTMEPDYEIPEEKK
KLVTELKTNAKKAKKIWLASDEDREGEAISWHLCEVLGLDEEKTNRIVFHEITKQAILDA
IKNPRHLDMNLVNAQQARRVLDRLVGFKLSPILWRKVKPALSAGRVQSVAVRLIVERERE
IQKFQSVPYYRVTAIFALISDSGNATEVKTELDQRFNTHEEVEAFLEKCKDAKFMVESVT
KKPLKRSPAPPFTTSTLQQEAARKLGFTVVQTMMIAQKLYESGRITYMRTDSVNLSTLCS
NASKEEIIREYGKEYSQTRAYHTSSKGAQEAHEAIRPTYMNEPTIEGTAQEKRLYELIWK
RTIASQMADAQLEKTTININIGNTSEKFVATGEVVSFDGFLKVYLESTDDEEHAEDSSHI
LPALKEGDELQRREILATEKYSLAPARYTEASLVKKLEDLGIGRPSTYAPTISTIQQRQY
VVKGDKTGEERTFTIDSLKGIKITQKLKKEMAGSEKGKLLPTDIGIVVNDFLMENFPNIM
NYNFTADVEKKFDDIAEGKTEWTNWMKDFDKGFEPEVKEVLEARNQHKAGERNLGNDPKT
GKPVFVKIGRFGPVVQIGSAEDKDKPQFAQLPSDKSIETITLEEALELFKLPRELGDYEG
ITVTVSSGRYGPYILHNRKYVSIPKEDDPLTITLDRAIELIKEKREAEEKRHLKVFDEDD
KMEILNGKYGPYIAYDGKNYRIPKAKHESAEELTYEECMEIIKAAPEPKARGRKKS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaatttagtaatcgtcgagagccctgcgaaggctaaaaagatcgaagagttt
ttaggtaaggactataaggttatgtcttcttacggtcatatccgtgacctgaagaagaag
gaacttagtataaacgagaaaaccatggaacctgattatgagattccagaggaaaagaaa
aaactcgttacagaattgaaaacgaatgcgaagaaagccaagaaaatctggttagcatcc
gatgaggaccgcgagggagaagccatcagctggcacctttgcgaagtactgggattggat
gaggagaagacaaaccgtattgtcttccacgagattaccaaacaggctattcttgacgca
atcaagaacccacgccatctggacatgaacctggtgaatgcccagcaggcacgtcgtgta
ctcgaccgactagtaggtttcaagctttctcctatcttgtggagaaaggttaagccagcc
ctttctgcaggtcgtgtacagagtgttgctgtccgtctgatagtagaacgtgagcgtgaa
atccagaagttccagagtgttccatactatcgcgttaccgctattttcgccctgatcagc
gacagcggcaatgcaacagaggtaaagacagaactggaccagcgtttcaatacccacgaa
gaggttgaagctttccttgagaagtgtaaagacgctaagtttatggttgaatctgtaacc
aaaaagcctttaaagcgttctcctgcaccacctttcactacttctactctgcaacaggag
gcagcacgcaagcttggtttcaccgttgtacagaccatgatgatagcccagaaactttac
gaaagcggacgcatcacttacatgcgaaccgatagcgtaaacctctctacgctctgttcc
aacgccagcaaagaagagattatcagagaatatggcaaggaatacagccagactcgtgcc
taccacaccagttcaaagggtgcacaggaagcgcacgaggctatccgtcctacatatatg
aatgaaccaaccatcgaaggaaccgctcaggagaagcgcctttacgaactcatctggaag
cgtaccatcgcatctcagatggctgacgcacaactcgaaaagacaaccatcaacatcaat
atcggcaacacaagcgaaaagtttgttgctaccggcgaggttgtttcattcgatggtttc
ctcaaggtttatcttgagtcaaccgacgatgaagagcatgctgaggattcttcccacatt
cttccagccctgaaagaaggcgatgaattgcagcgcagagaaatccttgctacagagaag
tattctctggctcctgcaagatacacagaggccagtctggtgaagaaactggaagatctc
ggcatcggccgtccatctacctatgctccaactatcagtaccatccagcagcgtcaatac
gtggtaaagggtgacaagacgggcgaagagcgcacatttaccatagattccctgaagggc
atcaagataacccagaagttgaagaaagagatggcaggctctgaaaagggtaagcttctg
cctactgatatcggcatcgtagtaaacgatttcctgatggagaacttcccgaacatcatg
aactacaactttacggcagacgtagagaagaagtttgatgatattgcagaaggaaagacc
gaatggaccaactggatgaaggatttcgacaagggctttgagcctgaagtgaaggaagtt
ctggaagcacgcaaccagcacaaagccggcgagcgcaatctcggaaatgatccaaagaca
ggaaagccagtattcgtcaagattggccgttttggaccagtggtacagattggttctgct
gaggataaggacaagcctcagtttgcccagttgccatcagacaagagcatagaaaccatc
accctggaagaagctttggaactcttcaagctgccaagagaactcggtgattatgaaggc
attactgtaacagttagctctggtcgctacggcccttacatcctccataaccgcaagtat
gtttctattcctaaggaggatgatccgctgaccatcaccctggatagagccatcgaactg
atcaaggaaaagcgcgaagccgaagagaagcgccatctcaaagttttcgatgaggacgat
aagatggaaattctcaatggcaagtatggtccatacattgcttacgacggcaagaattac
cgcattccaaaggcaaaacatgagagtgcagaggagcttacatacgaggagtgtatggaa
attatcaaagctgctccagaaccaaaggctagaggcagaaagaaatcataa
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