Segatella copri: LK433_02135
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Entry
LK433_02135 CDS
T07933
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcoi
Segatella copri
Pathway
pcoi03030
DNA replication
pcoi03410
Base excision repair
pcoi03420
Nucleotide excision repair
pcoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK433_02135 (polA)
03410 Base excision repair
LK433_02135 (polA)
03420 Nucleotide excision repair
LK433_02135 (polA)
03440 Homologous recombination
LK433_02135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcoi03032
]
LK433_02135 (polA)
03400 DNA repair and recombination proteins [BR:
pcoi03400
]
LK433_02135 (polA)
Enzymes [BR:
pcoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LK433_02135 (polA)
DNA replication proteins [BR:
pcoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LK433_02135 (polA)
DNA repair and recombination proteins [BR:
pcoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LK433_02135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK433_02135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UEA43401
LinkDB
All DBs
Position
524684..527446
Genome browser
AA seq
920 aa
AA seq
DB search
MDKLFLLDAYALIYRSYYAFMKAPRINSKGLNTSCVMGFCNTLNEILTKEKPTHIAVAFD
HGKTFRHEAFPAYKAQREETPEDIKLSVPIIKNILEAYHIPILQVDGFEADDIIGTVALK
AGEKGMETYMLTPDKDYAQLVRNNVFMFRPRHGGGYEKLGVQEIEEKYSITSPLQVIDLL
ALMGDSADNFPGCPGVGEKTAIKLINEFGSVEGLIENSSQVKGKLREKVEGAVEDIRMSK
FLATIRTDVPVEIRMEDLKRVEPDNTKLDEIFTELEFKSFANRVLNKPKKVQTKAIGELD
LFGVQLADSKEEPKNASFETIKTTSHSYKLIDTEVDAKKLYDYLLTFNILSLDTETTSTT
AIDAELVGLSFAVKEKEAFYVAIPANREEALKIVNIFKPLYENPEILKVGQNIKYDYEVL
INYGIEIQGKMFDTMLAHYLIQPELYHNMDYLAEVFLNYQTIHIEELIGPKGKNQKSMRD
LAPSDIYEYAAEDADITLRLKNVLESKLKEIDCEDLFWNVEMPLVPVLAHMEMTGVCIDT
DTLKETSENLTNRLNEIEHHIYELAGESFNIASPRQVGEILFGKMKIVEKPKKTKTGQYV
TSEEVLQQLRSKSPIIDEILNYRGLKKLLGTYIDALPKLINSRTGHIHASFNQAITATGR
LSSSDPNLQNIPVRDDDGKEIRRCFIPEPGCLFFSADYSQIELRIMAHLSQDPNMVEAFR
EGSDIHAATAAKIWHEDIKEVTDAQRKKAKTANFGIIYGITTFGLAQRMNIENREAKQII
EDYFRTFPGVQAYMEKAKEMAREKGYAETLFHRRRYLPDINSKNGTVRGFAERNAINAPI
QGSEADIIKVAMIRIFNRFRAEGIRSKMIIQVHDELNFSVYPEEKEKVEKIVVEEMQNAY
QLSVPLVADAGWGNNWLEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggataaattgttccttttagacgcgtatgcgctcatttataggtcgtattacgccttt
atgaaagcccctcgaatcaattcgaagggactcaatacttcgtgtgtaatggggttctgc
aataccctcaacgagatacttaccaaggagaaacctacccatattgcggtggctttcgac
catggcaagaccttccgtcatgaggctttccctgcatataaagctcaacgagaagagaca
ccggaagacatcaaactctctgtgcctatcatcaaaaatatcctggaggcatatcatatc
cctatccttcaggtagatggtttcgaggcggatgatatcattggaacagttgccttgaag
gcaggtgaaaaggggatggaaacctacatgctcacacccgataaggattacgcacaactg
gttcgtaacaatgttttcatgttccgtcctcgtcatggcggtggatacgaaaagttgggc
gtacaggaaattgaagagaaatacagcatcacttccccactccaggttatcgacctcctt
gccctgatgggcgactcagctgataacttcccaggctgtccgggcgtgggagaaaagaca
gccatcaaacttatcaacgagttcggtagtgtagaaggtcttatcgagaactcttctcaa
gtgaaaggcaagctccgcgaaaaagtggagggtgcagtagaagatatcaggatgtcaaag
ttcctggcaaccatacgaaccgatgttccggtagagatcaggatggaagatttgaaacgg
gtagagccagacaatacaaaattggatgaaatcttcaccgagttagaatttaagtcgttt
gctaatcgagttcttaacaaacctaaaaaggtgcaaacaaaggctataggagaactcgat
ttatttggcgtacagctggcagatagtaaggaagagccaaaaaacgcgagttttgagact
attaaaacgacctctcattcatataaacttattgatacagaagtagatgcaaagaaactt
tatgactatttattgacattcaatattctcagtctagacacagagaccacatctaccact
gctattgatgcagaattggtgggtttgagctttgccgtgaaggaaaaagaggctttctac
gtagcaattccggcaaatcgtgaagaagccttaaaaatcgtaaacatcttcaaacctctc
tacgagaatccggaaatcttgaaagtggggcagaacatcaaatacgattacgaggtgttg
ataaactacggcatagagattcagggcaagatgttcgatacgatgctcgcccactatctc
atccagccagaactttaccacaacatggattacttggcagaagtattcctcaactatcag
accatccacatcgaagaactgattggtccgaagggaaagaatcagaagtcgatgcgcgat
ctcgccccatcagacatttacgaatatgctgccgaagatgccgacatcaccttgagattg
aaaaatgtgctcgaatcaaaactcaaagagatagattgtgaagatctgttctggaatgta
gaaatgccgcttgtacctgttttagcccacatggagatgacgggagtatgcatcgacacc
gacaccctgaaggaaacatcggagaatctcaccaaccgcctcaatgagatagaacatcat
atctatgagttggcaggcgaatcgttcaatatcgcttccccacgccaggttggagaaata
ctcttcggaaagatgaagattgtggagaagcctaagaagacgaagacgggccagtacgta
acaagtgaagaagttcttcagcagctgcgcagcaagagtccaatcatcgatgagatactg
aactacagaggtttaaagaaacttttgggaacctatatagatgcccttccaaagcttatc
aactctcgcaccggtcacattcatgcctctttcaaccaagccatcacagccacaggacgt
ctttcttcaagtgatccaaacctgcagaatattcctgtacgcgatgacgatggcaaggag
atacgcagatgcttcatcccagaaccaggctgcctgttcttctctgccgactattcacag
atagaactacgcatcatggcacacctgagccaggatccaaacatggtagaagcattccgt
gaaggctctgatattcatgcagctacagctgccaagatttggcacgaagacatcaaagaa
gtaacagatgcacagcgcaagaaggcaaaaactgccaacttcggcatcatctacggcatc
acgaccttcggtcttgcccagcgcatgaacatcgaaaaccgagaggcaaagcagatcata
gaagactacttccgcaccttccctggtgttcaggcttacatggagaaggcaaaggaaatg
gcaagagagaaaggctatgccgaaaccctcttccaccgccgtcgctacctgccagacatc
aacagcaagaatggtactgtaagaggatttgccgagcgcaatgccatcaatgcccctatc
cagggctctgaggcagacatcatcaaagtggctatgatccgcatcttcaaccgattcaga
gcagaaggcatcaggagcaagatgattatccaggtgcatgacgaactcaatttctcagta
tatccggaagagaaggaaaaggtagagaagattgtggtagaagagatgcagaatgcctac
cagctcagtgtacctttggttgctgatgccggatggggaaacaactggctagaagcacat
tag
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