Segatella copri: LK433_03530
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Entry
LK433_03530 CDS
T07933
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_03530
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_03530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
UEA43657
LinkDB
All DBs
Position
complement(858332..859966)
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AA seq
544 aa
AA seq
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MKIKNILPVAAMAVASLGFSSCVGDLDADNINPQQVPTANYDALLNKVYANMVLTGQKGP
DGSGDIDDIDEGTSSLIRQLWNANELPTDEAECIWGDAGIPEFNHASWGDSHPMMKALYY
RLYMGITYANNYLESTANSTDPEISTKRAEARFLRALHYSYLMDLFGNVPLVLNVSKESA
PQVSRKYLFDFINGELREVCGETAGAQEVLSDAKVVNGKQDGYGRANKAAAWLLLARDYI
NAKVYSGTEHNDSAKYFAQKVIDTPYNLCKTPTGSYSGFQKLFMADNDVNGAENEIILPA
IHDGWDTQTWGGCLFLIASTTDADIIKNYPTGTSEQWGGNHARKQFVQKFFPSSQPIEGT
PTEVAAQAGDNRALFYTKGFKMSITKETDFKSGYAYVKFLNTYAGSGSPKHNQFVDTDFP
MMRYAEALLTYAEADARMNNGSCTNDGLAKIKEIRERAGIDVSNLTSFTLDDICDEWSRE
FAYEGRRRMDLIRFDKFGGQSKYKWEWMGGTQDGTPFDKHFNIYAIPISDINSNTTGLKQ
NPDY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaaatatattgcctgttgcagctatggctgtagcatcattaggattctcg
tcatgtgtaggtgatttggatgcagacaacatcaacccacagcaggttccaaccgccaac
tatgacgctctcctaaacaaggtatatgctaacatggtactgacaggtcagaaaggacct
gatggaagtggcgatattgacgatatcgatgaaggtacttctagtttgattcgtcagttg
tggaatgccaacgaacttcctactgatgaagcagagtgtatttggggtgatgcaggtatt
cctgaattcaaccacgcttcatggggtgattcacacccaatgatgaaggcgctttactat
cgtctttacatgggtatcacatatgcaaacaactatttggagtcaacagccaactctaca
gatcctgaaatcagtaccaagcgtgcagaagcccgcttcttgagagctcttcactactct
tatctgatggatctctttggtaatgttccattggtacttaacgtatctaaagaatcagcg
cctcaggtaagccgcaaatatctcttcgactttataaatggtgaacttcgtgaagtttgt
ggcgaaacagctggtgcccaagaggttttaagcgatgcaaaggtagtaaatggcaaacaa
gatggttatggccgtgcgaacaaggcagcagcatggttgctcttggcccgcgactatatc
aatgctaaggtatattctggtacagaacataacgactctgccaagtatttcgcacagaaa
gttattgacactccatataacttgtgcaagacacctactggcagttactcaggcttccag
aaactctttatggcagataatgatgtgaatggtgcagaaaacgagattattcttcctgca
atccacgatggttgggatactcagacatggggtggttgcttgttcctgattgcttctact
actgatgccgacatcataaagaattatcctacgggaacttcagaacagtggggtggtaat
cacgcccgcaagcagtttgtacagaagttcttccctagcagtcaacctatagaaggcacc
cctactgaggttgcagctcaagctggcgacaatcgtgctttgttctataccaagggcttc
aagatgagtattacaaaggaaacagacttcaagtcaggttatgcttatgtcaagttcctt
aatacttatgcaggttctggttctccaaagcataatcagtttgttgataccgatttccct
atgatgcgttatgcagaggcacttttgacttatgcagaagctgatgcccgcatgaacaat
ggttcttgcacaaacgatggtcttgctaaaatcaaggagattcgcgaaagagcaggtata
gatgtttctaacttgacctcattcactcttgatgacatctgcgatgagtggtctcgtgag
tttgcttatgaaggacgccgccgtatggacttgattcgtttcgacaagttcggtggccag
agcaaatacaagtgggaatggatgggtggaactcaggatggaactccattcgacaagcac
ttcaacatctatgcaattcctatcagtgatatcaatagtaacacaacaggtttgaaacag
aaccctgattattaa
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