Segatella copri: LK433_03595
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Entry
LK433_03595 CDS
T07933
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_03595
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_03595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
UEA43668
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Position
884587..886344
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AA seq
585 aa
AA seq
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MKLYKLSLALFLGLGAMATTSCEDKLEVTNPNQQTTGTFGFNADDLEECVIAAYNHIRME
GSSARVGYTLDVTRGDEVWNSSQVWYMPFDDMNDPVTDEISFWPWREAYYTINVCNFILS
RTTGDDASLSESMKRIKGQALFLRGYSYYTLAGYYQNPALITDYANYSSLDGLYGKNSTY
DDVLDQVEKDFAEAMTLLPSRDAGGEWAKGRATCGAAAGYYARTLMQRHKYSDALVVLKD
IMNKKYGSYKLMANYGDNFREGSAYENNAESLFEIQYLDYGSQGVDDEWTPVNTSPNATQ
GHAVESNFAPGRFGGWADLSASPWLYNLFKQERTTAGKLDPRLYWTIGTYENEWEGFENG
NVAYTSQMTATDTIITNNNYGGLPIAKWTNFRTNLYDKVTTGLHCGINLRMMRYSDVLLR
AAECENEVNGPTQQAIDWINQVRERANLKDLSLSDFDTKDKLFEQIANVERPKEFGCENG
RGLDLIRWGFFYDQGRLAQLKEHGTFRRSPYKAKEAVSYSMVGVDPELKSSYDTYVPGHE
FLPIYQGLLNDNPNLTGNSANTNTDNSSDFFGRGWTVHPVVNLGN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatataaattatcattagctctcttccttggcctcggtgcaatggcaactaca
tcatgtgaggacaagttggaggtaacaaatccaaaccagcagaccaccggaaccttcggt
ttcaatgcagatgatttggaggagtgcgttatcgcagcatacaaccatatccgtatggaa
ggttcttctgctcgtgtaggctatacccttgatgtaacacgtggcgatgaggtttggaac
tcatcacaggtatggtatatgccattcgacgacatgaacgacccagtaacagacgaaatc
tcattctggccttggcgtgaggcttactatactattaatgtatgtaacttcatcctctca
cgtaccacaggcgatgatgcttcgctcagcgaaagcatgaagcgaatcaagggacaggct
ctcttcctccgcggttattcatactatacattggcaggatattatcagaatcctgcgctg
attactgattatgccaactattcttctctggatggtctctatggcaagaacagtacctac
gacgatgtgctcgatcaggtggagaaggatttcgcagaggctatgactctcctcccatct
cgcgatgcaggtggcgagtgggcaaagggacgtgctacctgcggtgctgctgccggttac
tatgcccgcactctgatgcagcgccataagtatagcgatgcactcgttgtactcaaggac
atcatgaacaagaagtatggctcttacaagctgatggccaactatggcgacaacttccgt
gagggttctgcttatgagaacaatgccgagagcctcttcgaaatccagtatctcgactac
ggttcacagggtgtggatgatgagtggactccagttaatacaagccctaacgctacacag
ggacatgccgttgagtctaacttcgctccaggtagattcggtggatgggctgacctctca
gcttctccatggttgtacaacctcttcaagcaggagcgtaccacagctggtaagttggat
ccacgtctctactggaccatcggtacctacgagaatgaatgggaaggatttgaaaatggc
aacgtggcttataccagtcagatgacagctactgatacaatcataaccaacaacaactat
ggtggtcttcctatcgctaagtggaccaatttccgtaccaacctttatgataaggtgaca
accggtcttcattgcggtatcaacctccgtatgatgcgttactcagacgttttgctccgt
gcagcagagtgcgagaacgaggtgaacggtcctacacagcaggctatcgactggattaac
caggttcgtgagcgtgctaacctgaaggatttgagtctctcagacttcgataccaaggat
aagctcttcgagcagattgccaatgtagagcgtccaaaggagttcggttgcgagaatggt
cgtggtcttgacctgatccgttggggattcttctatgatcagggtcgtttggctcagttg
aaggagcacggaaccttccgtcgttctccatacaaggctaaggaagcagtcagctactct
atggtaggtgttgatccagagttgaagagctcttacgatacatacgtaccaggtcatgag
ttcctgcctatctatcagggcttgttgaatgataaccctaacctgacaggtaactcagct
aatacgaatacggataactcatctgatttcttcggaagaggttggactgttcatcctgta
gttaacttgggcaactaa
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