Segatella copri: LK433_04485
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Entry
LK433_04485 CDS
T07933
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_04485
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_04485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_19
TPR_1
TPR_12
TPR_8
TPR_2
TPR_14
NatA_aux_su
TPR_10
Forkhead
TPR_17
TPR_7
Motif
Other DBs
NCBI-ProteinID:
UEA43830
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Position
1105434..1106846
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AA seq
470 aa
AA seq
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MKQKLVYMVLLLGMVMGLASCDNYLNIEPKGKRIPKSLADYEAFLRYEYGTHRMPVLQTC
YLLNDEYLTNSYASYYPMYKANYNWEEETDRAYWNSADESTYYVAYGTINTCNLILEDVP
NTTEGTEKEKAEVMAYARVLRAMNYFNLANYYADTYEPSNAASKLSVPLITSSLQNAPYH
QATIQEIYEFILNDLNTSVADLPDMGTTLLHPGKGAAYAMLARTYLQMMNYEKALEFADK
ALAINDKLVDWVGFYNDNKGVIGQEGVYPSLKTPLGFDSQDCYNFNYADNSSNYASAIFK
IPVNRAAGFEEGDAYFLSNWKLRTMGAETYYQGLTNGYINLAGMRTVEQYLIKAECLARK
NQLTDAMDVLNEVRKTYILPEKYQPLSASSVAEAIRYIRQAKDNQLIFSIVPFGDARRFN
AEGTYARTLTKEIDGKQISLAPSSHLWTFPFPKGAIDNPGNGSFVQNVEK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaaattagtatatatggtgttgttgctgggcatggttatgggacttgcctct
tgcgataactatctcaatatagaaccaaagggcaaacgcatccctaagtcgctcgccgac
tatgaggcttttctccgttacgagtatggtactcatcgcatgccggttttgcaaacgtgc
tatttgcttaatgatgaatatctcaccaattcgtatgccagttattatccgatgtataag
gctaactacaattgggaggaggaaaccgatcgtgcctattggaactctgcagatgagagt
acttattatgtggcttatggcactatcaatacctgcaatctgatattggaagatgtgcct
aatacaacagaaggtactgagaaagaaaaggctgaggtgatggcatatgccagagtgttg
cgtgcgatgaactatttcaatctcgctaattattatgctgatacctacgagccttcaaat
gctgccagtaagttgagtgtacctctgattacgagcagtcttcagaatgctccatatcat
caggccaccattcaggaaatctatgaattcattttgaatgatttgaacacgtcggtagct
gatcttccagatatgggtaccacgctcctccatccgggcaagggagctgcctatgctatg
ttggcacgtacctatcttcagatgatgaactatgaaaaggcgttggagtttgctgataag
gctcttgccattaatgataagttggttgattgggttggattctataatgataataagggt
gtgataggccaagagggtgtttatccttctttgaaaacgccattgggatttgatagccag
gactgttataatttcaattatgccgataatagttccaactatgcatctgcgatattcaag
ataccggtaaatcgtgctgccggattcgaagagggagatgcttatttcttgagcaattgg
aaactaagaacgatgggtgcagaaacttattatcaggggttgaccaatggctatatcaat
cttgctggtatgagaaccgtggagcagtatcttatcaaggctgaatgcttggctcgtaag
aatcagttgacagatgctatggatgtgctcaatgaggtgcgtaagacatatatccttcca
gagaaatatcagccactatcggcgtcctctgtggcagaagctatccggtatatacgtcaa
gctaaggataatcaacttatcttctctatcgtgccgtttggcgatgctcgtcgcttcaat
gctgaaggtacctatgcccgcacgctgacaaaagagatagatggcaagcagataagtctt
gctccatcctctcatctctggaccttcccattccctaagggagccattgataatcctggc
aacggaagtttcgtacagaatgtggagaagtaa
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