Segatella copri: LK433_05170
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Entry
LK433_05170 CDS
T07933
Name
(GenBank) RNA-binding S4 domain-containing protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcoi03009
]
LK433_05170
Enzymes [BR:
pcoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LK433_05170
Ribosome biogenesis [BR:
pcoi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LK433_05170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Prion_octapep
DUF7417
Motif
Other DBs
NCBI-ProteinID:
UEA43952
LinkDB
All DBs
Position
1261257..1262690
Genome browser
AA seq
477 aa
AA seq
DB search
MDSEFENKPQGQSSENERTREGYNPAGGYQKSYRPVGRTQRPRINSHRAYSSDRSSSNSE
GGFRPEGFGAVLQSTGSSERPQRSSYQSRGGYGNSNRGGYQPRQQGGYQSRPQQGGYRPR
YNNNDEQGGYQPRQQGGYQPRQQGGYQSRSQQGGYGNNNRGGYGRPQGGGYGNNRGGGYG
RPQQGGYGNNRGGYGRPQGGGYGNNRGGGFRQHTPGYDPNAKYSMKKRIEYKEENIDPTE
PLRLNKFLANAGVCSRREADEFIQAGLVTVNGEVVTELGTKILRTDEVKFHDAPVTLEKK
VYVLLNKPKDYVTTSDDPQQRKTVMDLVKDVCPERIYPVGRLDRNTTGVLLLTNDGDLAS
KLTHPKFLKKKVYHVHLDKNLTAHDMDQIREGITLEDGEIKADAVEYADDRDKAQVGIEI
HSGKNRIVRRIFESLGYRVTKLDRVQFAGLTKKNLRRGDWRFLTEKEVDMLRMGAFE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaatttgaaaacaaacctcaaggtcagtcttctgagaatgagagaacccgt
gagggctacaacccagcaggtggttatcagaagagttatcgaccagtaggtcgcacacag
cgtcctcgtatcaattcacatcgcgcatacagcagcgacagaagtagcagtaacagcgaa
ggcggtttccgtcctgaaggtttcggtgctgtcttgcagagtacaggcagcagcgagcgt
ccacagcgcagcagctatcagagccgtggtggttatggtaacagcaaccgtggtggctac
cagccacgtcagcagggaggctatcagtctcgtcctcagcagggtggctatcgtcctcgt
tacaacaataatgatgagcagggtggttatcagcctcgtcagcagggtggctatcagcca
cgccagcagggcggctaccagtctcgttctcagcagggtggttatggtaataacaaccgt
ggtggttatggtcgtccacagggtggcggctatggcaacaaccgtggtggcggctatggt
cgtcctcagcagggtggttatggcaacaaccgtggcggttatggccgtccacagggtggt
ggctatggcaacaaccgtggtggcggtttccgtcagcacactcctggttacgatccaaat
gctaagtatagcatgaagaagcgtatcgaatataaggaggagaacatcgacccaacagag
ccattgcgcttgaacaagttcctcgccaatgctggtgtatgctctcgccgtgaggctgat
gagttcatccaggctggtctggtaactgtcaatggtgaggtagttaccgagttgggtacc
aagatccttcgtaccgatgaggtgaagttccacgacgctcctgtaactttggagaagaag
gtatacgtattgctcaacaagccaaaggattatgttacaaccagcgatgatcctcagcag
cgcaagactgtgatggacctcgtaaaggatgtttgtcctgaacgtatctatcctgtaggc
cgtctcgaccgtaatacaacaggtgtacttctcttgaccaacgatggtgacctggcttct
aagcttactcaccctaagttcttgaagaagaaggtttatcacgttcacctcgataagaac
ctgacagctcacgatatggatcagatccgtgagggtatcaccttggaagatggtgagatc
aaggcagatgctgtagagtatgctgatgatcgcgacaaggcacaggttggcatcgagatt
catagtggcaagaaccgtatcgtgcgccgtatcttcgagagcctcggctatcgtgttacc
aagctcgaccgtgtacagttcgcaggtttgactaagaaaaatctccgtcgcggtgactgg
cgcttccttactgagaaggaggtagacatgctccgcatgggtgcttttgaataa
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