Segatella copri: LK433_05490
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Entry
LK433_05490 CDS
T07933
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_05490
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_05490
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
DHFR_2
Motif
Other DBs
NCBI-ProteinID:
UEA44010
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Position
1343122..1344804
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AA seq
560 aa
AA seq
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MKRYRFLFLLLAALSMTSCLDEHPKDQLDEDAIYGSASDIYINAVASLYNYIGGANESES
IQGTCRGIYDYNTLTTDEAMIPIRGGDWYDGGLWNAMYQHRWSADDQSLYDTWKYLYKVI
VLANKSLDIISNKSALLSAAQQEEYRAEIRAIRAMFYYYAMDMFGRVPLVLSSSEQLHSS
LFQGQTDRSSIFQFVFQELQQVLPSLPDQHSNKEGNYYGRITQPVVNFLLAKLALNAEIY
MYDDWTQGYASRPKGSDIHFSVPASDASLRNGDQVDFRKLNAWETCIYYCDKLAEEGYVL
ESDDSFNFSTHNETSKENIFTIPMDKNIYTNQFHYLFRSYHYTHGGALGWGSENGTCATI
STMKANHYGEAGEDARCKMNFVAGVVKVDGHELLMDNGKPLEYQPFEVAQNLTNSKFVKT
AGARMAKYEVDRTSYMDGKLQSNDIVLFRYADALLMKAEAKVRNGENGDEELNRIRARVG
MPYRKATLDNILEERLLELVWEGWRRQDLIRFGKFTGAYDLRTPLQGESSGYTTVFPIPQ
KCIDLNSELVQNKGYVNILK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatatagatttttatttctgctgctggcggcattgtctatgacatcctgcctg
gacgaacatcctaaggatcagttggacgaggatgccatctatggctctgcatctgatatt
tatatcaatgccgtggcttctctctataattatataggtggagctaacgagagtgagagc
atccagggcacctgccgtggcatttacgattataatacgctgaccacagatgaggcgatg
attccgattcgaggcggcgactggtatgatggtggcctctggaatgccatgtaccagcat
cggtggagtgccgatgaccagtctctttatgatacgtggaagtacctttataaggtaatc
gtgctggctaataagtctttggatattatcagcaacaagtcggccctgctttctgccgca
cagcaggaggaatatcgggctgagataagagccatccgggctatgttctattattatgct
atggacatgttcggtcgggttccattggtcctttccagttcagaacagctccattccagc
ctgttccaaggtcagacagatcgcagttctatcttccagtttgtctttcaggagttgcag
caggtattgccttcacttcccgaccagcacagcaataaggaaggcaattattatggtcgc
atcacccagccggtagtcaactttctgttggcaaagttggcattgaatgcagaaatctat
atgtatgatgactggacccagggttatgcgagccgtccgaagggaagtgacattcatttc
tctgtgccggcttctgatgcctctttgcgtaatggcgatcaggtggacttcagaaagttg
aatgcctgggaaacctgcatttattattgtgataaactggcagaagaaggctatgtcctg
gagtcggatgattcattcaatttctctacgcataatgagacatcgaaggagaatatcttc
acgattccgatggataagaatatctataccaaccagttccattatctcttccgctcttac
cattatacgcatggcggtgccttgggctggggaagtgagaatggtacctgtgccacgatt
tctacgatgaaagccaatcattatggcgaggctggtgaagatgcccgttgcaagatgaac
tttgtggcgggagtggtaaaggtagatggtcatgaactgctgatggataatggaaagccg
ttggagtatcagccttttgaagtggctcaaaacctgaccaacagtaagtttgtcaagacg
gctggagcgaggatggcgaagtatgaggtggatagaacctcttatatggacggcaagttg
caaagtaacgacatcgttcttttccgatatgcagatgctttattgatgaaggcagaggca
aaggtccgaaacggagagaatggtgatgaggagttgaatagaattcgtgcccgtgtggga
atgccttaccgtaaggctacgctcgataacattctggaagagcggttgctggagttggta
tgggaaggatggcgtcgtcaggatctcatccgtttcggcaaattcaccggtgcctacgat
ctccgtacgcctcttcagggtgaatcctccggctacaccaccgtcttcccgattcctcag
aaatgcatcgatttaaattctgaattggtacagaataagggatatgtcaatattttgaag
taa
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