Segatella copri: LK433_05980
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Entry
LK433_05980 CDS
T07933
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcoi01011
]
LK433_05980
Enzymes [BR:
pcoi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LK433_05980
Peptidoglycan biosynthesis and degradation proteins [BR:
pcoi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LK433_05980
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
MPC
Gln-synt_C
HB_ELP1
Motif
Other DBs
NCBI-ProteinID:
UEA44105
LinkDB
All DBs
Position
complement(1457629..1458987)
Genome browser
AA seq
452 aa
AA seq
DB search
MKKILVMAAAMLFSLQGIHAQTDVKEETDNDDIITVTDKDGKQEEIEVPEGLEDNLDSLL
HLYNAQTYMMADTTCKYRDVNPVFEKEVYIDRLKRMPTIIEMPYNEVVQKFIDRYSGKLR
RSVSFILGASNFYMPIFEEALEAYNLPLELKYLPVIESALNPKAVSRVGATGLWQFMLPT
GKRYGLEVNSLIDERRDPVKASYAAAHYLSDLYKIFDDWSLVIAAYNCGPTNVNKAIHRA
KGNADYWNIYPYLPKETRGYVPAFIAANYIMNYYCDHNICPMVSELPVKTDTIVVSKDIH
LEQISKVLNINIEHLRNLNPQYRHDIINGLNHPMVLRLPSTLIGSFIDQQDSICAYRADE
LFLKRATVDINDAQPTYSRPRSSYSRHSASSRSKKSSKRDRNRKQGSKSVTIKNGDTLSE
IAARHGTTVKKLRKLNGIKGSSIRAGKKIKVK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatactagtcatggcagcagcgatgctgttcagcttacaaggcattcatgcc
caaaccgacgttaaagaagaaacagataacgatgatatcatcaccgttaccgacaaagac
ggaaagcaggaggaaatcgaagtaccagagggattggaagataacctcgacagcctgctc
cacctttacaatgcacagacttacatgatggcagatacaacctgcaaataccgcgatgta
aaccctgtcttcgagaaggaagtgtatatcgaccgtctgaagagaatgcctaccatcatc
gaaatgccatacaatgaggtagtacagaaattcatagaccgttacagcggaaaactacgc
cgttcagtaagttttatattgggagcaagtaacttctacatgcctattttcgaagaggca
ttagaggcttacaacctgccactggaattgaaatatctgccagttattgaatcggcactc
aaccctaaagctgtatcacgcgttggtgccacaggtttatggcagtttatgctgcctacc
ggcaagcgatatggactggaagtaaactcactcatcgatgaacgccgcgacccggtaaaa
gcatcctatgcagccgctcactatctgagcgacctgtacaagatattcgacgattggagc
ctcgtgattgcagcttacaactgcggtccaaccaatgtcaacaaggccatccatcgtgca
aaaggcaacgccgactactggaacatctatccatatctgccaaaggaaacacgtggatat
gtaccagctttcatcgctgccaactacatcatgaactactactgcgatcataacatctgc
cctatggtaagcgaactgccagtaaagacagacactatcgtagtatcaaaagatatccac
ctggagcagatttccaaagtgctgaacatcaacatcgagcacctgcgcaatctgaatcca
cagtatcgtcatgatatcatcaacggattgaaccatccgatggtattgcgtcttccatct
accctcatcggtagtttcatcgaccagcaggacagcatctgtgcttacagagccgatgaa
ctcttcctgaagcgcgctaccgtagatatcaacgatgcacagcctacctatagccgccca
cgaagcagctacagtcgccacagcgcttcttcacgcagcaagaagagcagcaagcgagac
agaaacagaaaacaaggcagcaagagtgttaccatcaagaatggtgataccctttctgaa
atagcagcacgccacggaacaaccgttaagaaactgcgcaaactgaacggcatcaagggt
agcagtatccgtgccggaaagaaaatcaaagtgaaataa
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