Segatella copri: LK433_06070
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Entry
LK433_06070 CDS
T07933
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
pcoi
Segatella copri
Pathway
pcoi00730
Thiamine metabolism
pcoi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LK433_06070 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcoi03009
]
LK433_06070 (rsgA)
Enzymes [BR:
pcoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
LK433_06070 (rsgA)
Ribosome biogenesis [BR:
pcoi03009
]
Prokaryotic type
GTPases
LK433_06070 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
RsgA_N
MMR_HSR1
FeoB_N
GTP_EFTU
ATP_bind_1
Septin
Ras
AAA_16
nSTAND3
AAA_29
MMR_HSR1_Xtn
AAA_22
AAA_7
Roc
RNA_helicase
cobW
ABC_tran
MobB
ATP-synt_ab
MnmE_helical
NACHT
DAP3
NTPase_1
RsgI_N
Motif
Other DBs
NCBI-ProteinID:
UEA44118
LinkDB
All DBs
Position
1475891..1476823
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AA seq
310 aa
AA seq
DB search
MRGLVIKNTGSWYTVKTDDGQLIESKIKGNFRLKGIRSTNPVAVGDYVQLITNQEGTAFI
SSIEDRQNYIIRKSPNLSKQSHILAANVDQALLVVTVNYPQTSTTFIDRFLAGAEAYRVP
VIIIFNKSDILSEEELHYEKMMCTLYETIGYKCIELSAATGEGVELLRPLIKDKKSLLSG
NSGVGKSTLINQLIPDAEQRTAEISEAHNSGMHTTTFSEMLELPEGGYLIDTPGIKGFGT
FDIEKEELTSYFKEIFKFSQDCKFSDCTHTHEPGCAVIKAVEEHYIAASRYQSYLSMLED
KDENKYREAF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagaggactcgttattaaaaatacaggcagctggtacaccgtcaagacagacgatggc
cagctgattgaaagtaaaatcaagggcaatttcagattgaagggcatccgcagcaccaat
cctgtggctgtaggcgattatgtgcagcttattaccaatcaggagggtacggcatttatc
tcttctatcgaagaccgccaaaactatatcattcgtaaatcacctaacctcagtaagcag
agtcatattctggctgctaatgtagaccaggcactgcttgtggtaacggtgaattatccg
cagacttctactaccttcatcgaccgattcctggctggcgctgaggcctatagagtacct
gttatcatcatcttcaataaaagtgacatactttcagaagaagaattgcattacgagaag
atgatgtgcacgctctatgagaccatcggatataaatgtatcgaattgtcggcagctaca
ggcgaaggtgttgaactgttgcgacctcttatcaaggataagaaatctttgttgagcggc
aacagcggggtaggaaagtcaaccctcatcaaccagctcattcctgatgcggagcagcgt
accgccgaaatcagcgaggcgcataatagcggaatgcataccacaaccttcagtgagatg
ctggaactgccggaaggtggttacctcattgatactccgggcatcaagggctttggtacc
tttgatatcgaaaaggaagagctgaccagctattttaaggaaatcttcaagttctctcag
gattgtaagttctccgactgtacccatacccacgaaccggggtgcgcggtaatcaaggcg
gttgaggaacattatattgcagctagccgctatcagagttatctctctatgttggaggat
aaggacgaaaataaatacagggaggctttttga
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