Segatella copri: LK433_06115
Help
Entry
LK433_06115 CDS
T07933
Name
(GenBank) response regulator
Organism
pcoi
Segatella copri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reg_prop
HATPase_c
Response_reg
Y_Y_Y
HTH_18
HisKA
SGL
HTH_AraC
Vgb_lyase
PQQ_3
DUF4381
Tectonin
PSII_BNR
HATPase_c_5
PQQ_2
HATPase_c_2
Imm27
HATPase_c_3
AvrE_T3Es
LapA_dom
PDE8A_N
MarR
Motif
Other DBs
NCBI-ProteinID:
UEA44125
LinkDB
All DBs
Position
1486409..1490497
Genome browser
AA seq
1362 aa
AA seq
DB search
MRKISTLMVSVLCMMMPVGAEAQVPTAFVSKGATDIQAQPHSVTQTNSGAQLAAIDPMVR
SITMDNGLPSNAVRSVVQGSKGYMWFGTDNGLCRFDGYDVKTYYNPFTTVDQFVSALTAC
EEGLLVGCNNGAYLFCNATDRFQKLSDKITAPVLNFSLDGDQNVWISTNGQGVFRYNRTT
HELHQYPMKNIQGKVQSTLVDANNQVWMLCNQGEASIYHLNKSTDQFEAFPLKGDATMFH
GMAMLATPDGNVYVGTWENGLYKLNADGSAEQLISGTLSNAVHHIHQLYCNDNKSLLIAS
DDGLVQYDIQNRIWHMLSEVNNPSRSTSERFVYGIADDNEGGIWVTTFYGGVNYLPSTSF
EERFHAYSARLGGLRGNVVGRFFEDRQHRIWIATDDAGLDCFNPQTNSFVSYPGKADMGK
YNVHALFADENDLWVGTYGNGVIRMNMATGAQQVFSTDGMVSGSNAYCIYRDRKNRLWAA
TMDGANLFDEGQQKFSKIKLFKSLTIDIKEDPQGNVWFATQGGGLWRLDKNNAWKQYKHV
ENDSTSLVSDQINCLVIGEKGQLYAATGEGLCEFLPSKGIFRRISIDAPSQDFTSLVISQ
GVMWISTSKGIVKYTPGEPVQLFNKYDGLTCDQFMPNAGLLASDGRIYFGSTRGFNCFYP
YLVKINQVAPPVAITSVELFGKPIEAGSDQLEKSLSHAAELNLSHNENTINISFAALSYV
SPEKNQYAYKLEGVDKDWIYTHEHRANYTNLPAGTYTFLVKATNNDGVWSKNEAKLKIVV
HPPFWWSLPAKILYLLLIGYAIYWFMQSRLKREKRRHQEELDQLELKQDQEMRDARLQFF
TMIAHEIRTPVTLIIGPLESLKEYWKQVAGKLSDGETITQTLSVIDRNAQRLLLLVNQLL
DFNKVQQKGMQVHFRLNNISKLMHAVAERFAPTFEQKSIRLDVDYPADELVAMIDQEAIT
KVISNLMTNALKYTEDYVRLSCRLLEDGNHFRIEVEDNGLGISPDEKEKIFGAFYQARDN
KPGTGIGLNIVKNLVEAHHGMVEVESAVGKGSTFIVTLPLNQLDAVVEKADEMVKEEETV
AEENLLTDETTVAQGSQKAGVAVASPLREPAKPTMLIVDDDEDMRQFVKAHFEKMYTVYT
ADNGKDALRKLEKHPVSLIISDWMMPEMDGPEFCRRVRENSEYSHLPFVMLTAKTDDAAK
TESMNCGADVYIEKPFSMKYLEASVRQLLEMRRLLRSKFSHTPLEPIAEIAPTQVDNAFL
ERMSRIIEENVANPELNVAFLAEKMGISRSSLFNKIRGLADVTPNEMIQLVKLKKGAKLL
KEGNYRISEISYMVGFSSPSYFAKCFQKQFGVKPMDFVAAES
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagatatctactctaatggtttctgtgctctgcatgatgatgcctgtaggggct
gaggcgcaggtgccgacagccttcgtctcgaagggggctacggatattcaggcgcagcca
cattcggtaacgcaaaccaactcgggtgcacaattggctgctatcgaccctatggtgcgc
tctatcacgatggataatggtttgccgagtaatgctgtgcgtagcgtggttcaaggttcc
aagggatacatgtggtttggtacagacaacggattgtgccgttttgacggatacgatgtc
aaaacctattataatccctttacgactgtagaccagtttgtgagcgcccttactgcttgc
gaagaaggactgctggtaggttgcaataatggagcctatctgttctgtaatgcaaccgac
cgattccagaaactgagtgataagattacggcacctgtccttaatttttcgcttgacggc
gatcagaatgtttggatttctaccaacggacagggcgtgttcagatacaatcggactact
cacgaactgcatcagtatccgatgaagaatattcagggtaaagtgcaaagtacgctggtt
gatgccaacaaccaggtatggatgctctgtaaccagggtgaagccagcatctatcatctc
aacaagtcgaccgaccagtttgaagcattccctctgaagggcgatgcaaccatgtttcac
ggcatggcgatgctggctactcccgatggcaatgtttatgtcggaacctgggaaaacgga
ctttacaagctcaacgccgatggtagtgccgagcagctcatcagcggaaccttgagtaat
gctgttcatcatatccatcagctttactgcaacgacaacaagtctcttctcatagccagc
gatgatggattggtgcagtatgatatccagaaccgtatctggcacatgttgtcggaagtc
aacaatccgagccggagtacgagcgagcgctttgtttatggtattgcggatgataatgaa
ggtggcatttgggtaactactttctatggtggtgtgaattatcttccttctacgagtttt
gaagagcgtttccatgcttattctgcccgtctgggcggattgcgcggtaatgtggtagga
agattcttcgaagaccgtcagcatcgcatctggatagctacggatgatgcgggactcgac
tgctttaatccccagaccaacagttttgtttcttatccgggcaaggcggatatgggcaag
tataatgttcatgcgctctttgctgatgaaaatgatctgtgggtaggaacctatggcaat
ggtgtcatcagaatgaatatggctaccggagcgcagcaggttttctctaccgatggaatg
gtttctggcagtaatgcctattgtatttatcgcgaccggaagaaccggctctgggcggct
acgatggatggtgccaacctcttcgatgaaggacagcagaagttcagcaaaatcaagttg
ttcaagtcgcttaccatcgatatcaaggaagatcctcagggcaacgtatggtttgctacc
cagggaggcggcttgtggcgcttggacaagaataatgcctggaaacagtataaacatgta
gagaatgattctacttcgctggtgagtgatcagataaactgtctggttattggcgaaaag
gggcagctctatgccgcaaccggcgaaggactttgcgaatttctgccttcgaaaggtata
ttccgacgcatctccatcgatgcgcctagtcaggatttcacgagtcttgtcatttcgcag
ggagtaatgtggatttctaccagcaagggaattgtgaaatatacgccgggtgaacctgtc
cagctgttcaataaatatgacggactcacttgcgaccagtttatgccaaacgccggactc
ctggcttctgatggcagaatctatttcggttctacaagaggtttcaactgcttctatcca
tatctcgtcaagatcaaccaggtagctcctcctgtagcaatcacctcggtagaactcttc
ggaaagccgatagaggcggggagcgaccagttggagaaatctctgagtcatgcagcagaa
ctcaatctgtctcataacgagaataccatcaatatctcgtttgccgccctgagctatgta
tcgcctgagaagaaccagtatgcttacaaacttgagggagtagacaaggattggatttat
acccacgagcatcgtgccaactataccaatcttcctgccggaacctataccttcctggtt
aaggcaaccaataatgatggtgtatggtcgaagaatgaggcaaaactgaagattgtggtt
catccgccgttctggtggtctttgccagccaagattctgtatcttctgctcatcggttac
gcaatctactggttcatgcagagccggttgaaacgtgagaaacgccgtcatcaggaagaa
ctcgaccagttggaactcaagcaggatcaggagatgagagatgcccgcctgcagttcttc
acgatgattgcccatgaaatccgtacgccggtaacgcttatcatcggacctttggagagc
ctgaaagagtattggaaacaggttgccggaaaactttccgatggtgagactatcacgcag
acgctttctgttatcgaccgtaacgcccagcgtttgctcctgctagtaaatcagctgctc
gatttcaacaaagtgcagcagaagggcatgcaggttcatttccgtttgaataacatttcg
aagctgatgcatgctgtggcagagcgctttgctcctaccttcgagcagaaaagcatccgt
cttgatgtagattatccagccgatgagctcgtggcgatgattgaccaggaggccattacc
aaggttatcagcaatctgatgaccaacgccttaaaatataccgaggattatgtacgcttg
tcctgccgcttgctggaggatggaaaccatttccgcatagaggtggaagacaacggattg
ggaatcagtcctgacgaaaaggagaaaattttcggagccttctatcaggcacgcgacaac
aaaccgggaaccggaatcggtctcaacatcgtgaagaatctcgttgaggctcatcatggt
atggttgaagtagaatctgcagtaggtaagggatctacctttatcgtaaccttgccgctc
aaccagttggatgctgtggttgagaaggcggatgagatggtgaaggaagaagaaactgtt
gctgaggaaaatctgctgacagatgaaactacagttgcgcaaggttctcaaaaggcaggc
gttgctgttgccagtccgcttcgtgaaccggcaaaaccgacgatgctgattgtggatgat
gatgaagacatgcgccagtttgtgaaggctcatttcgaaaagatgtatacggtttatacc
gccgacaacggaaaggatgcgctccgtaaactggagaaacatccggtttcgctcatcata
agcgactggatgatgccggagatggacggtccggagttctgccgtagggtgcgtgaaaat
tctgaatattctcatctcccgttcgtgatgctcacggcaaagaccgatgatgcggcgaag
acggagagtatgaactgtggagccgatgtctacatagaaaagccgttctcgatgaagtat
cttgaggcaagcgtaagacagcttcttgagatgcgccgtctgttgaggagtaagttctct
catactccgcttgagccgatagcagagattgctccaactcaggttgataatgcgttcctg
gaacgaatgtctcgcatcatcgaagagaatgtggcgaatccggaactcaacgtggcgttc
cttgctgagaagatgggcataagccgctcttcgctctttaataagattcgcggtcttgcc
gatgttacgccaaacgagatgatccagctcgtgaaacttaagaagggcgcaaagctcctg
aaagaaggaaactaccgcatcagcgaaatcagctatatggtaggtttcagcagtcctagc
tattttgccaagtgcttccagaagcagtttggcgtcaagccgatggatttcgtagctgcg
gaatcgtag
DBGET
integrated database retrieval system
