Segatella copri: LK433_06135
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Entry
LK433_06135 CDS
T07933
Name
(GenBank) LysR family transcriptional regulator
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoi03000
]
LK433_06135
Transcription factors [BR:
pcoi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LK433_06135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
ABC2_membrane_3
MarR_2
HxlR
HTH_34
HTH_30
HTH_5
Mga
Motif
Other DBs
NCBI-ProteinID:
UEA44129
LinkDB
All DBs
Position
complement(1494660..1495571)
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AA seq
303 aa
AA seq
DB search
MEIRQLKYFLKVAETLNFSEASRKLYITQSTLSQQISHLEQEIGMPLFERNSHEVYLTEA
GKELRPYAQNAVNSAEACVDHMNDLKEMLTGELNIGVTFSFSNIMSETLIAFLHAYPHVK
LNIQYRTMQELMDGLKKRELDLVLAFKPLKNEKAVDSRAIFSNRLAAIVNVNHPLARLSS
VKLSDLERYDLILPCKGLQARNAFDHMVEGKDLNYKIMVEVNNVNIIFDLLSRSNLVTIL
SESTTILQNGMKAIPIDAADNEMDGCIHILKDAYMKNSAQEFISMLSQNTSILANFALKD
ILR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacgacaactgaaatatttcttgaaggtagccgagacgctcaacttctcagaa
gcttcgcgcaagttatacatcacccagagcaccctctcacagcagatttcgcatctggaa
caggagattggtatgcctctcttcgagcgcaattctcatgaggtttacctcacagaggcg
ggcaaggaattgagaccttacgcccaaaacgcggtcaattctgccgaagcctgtgtagac
cacatgaacgatctgaaggaaatgcttacaggcgaactgaacatcggcgtaacgttctcc
ttcagcaacatcatgtccgagacgctcatcgcctttctccacgcctatcctcatgtaaag
ctcaacatccaataccgcaccatgcaggaactgatggacggactgaagaagcgcgaactc
gacctcgttctggctttcaagcctctgaagaacgagaaagcggtagacagccgagctatt
ttcagcaaccgtcttgccgccatcgtgaacgtgaatcatccgctggcgcgcctttcatcg
gtcaagctttccgatctggagcgttacgacctcatccttccttgcaagggtctgcaggca
cgcaacgcctttgatcacatggtagagggcaaagatttgaactacaagattatggtagag
gtgaataatgtaaacatcatcttcgaccttctgagccgcagcaatctggtgaccattctc
tccgaatcgaccaccattctgcagaacggcatgaaggcgattcctatcgatgctgccgac
aacgaaatggatggctgcatccacattctgaaagatgcttacatgaaaaactcagcccag
gagttcatcagcatgctgagccagaacaccagcatcctcgccaactttgcgctgaaggat
attctgagataa
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