Segatella copri: LK433_06230
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Entry
LK433_06230 CDS
T07933
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcoi03016
]
LK433_06230
Enzymes [BR:
pcoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LK433_06230
Transfer RNA biogenesis [BR:
pcoi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LK433_06230
Prokaryotic type
LK433_06230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
UEA44147
LinkDB
All DBs
Position
1515621..1516445
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AA seq
274 aa
AA seq
DB search
MDKITNQITMLGTGNATVSQIYNTCFLLKTPSTLMLVDAGGGNGILAQLKKVNVQISDIH
HLFVTHAHTDHVLGVIWVIRMVAQCKGYEGLLHVYGNDKVMKVIKTIIDMILAKKQLAKV
AERVVFHQLEDGECFEVGDMKLECFDIQSTKEKQFGFRAELPSSDESGKPLVLACLGDEP
YNEQNRRYIVGADWMMCEAFCLYADRDTFKPYEKCHSTALDAGKLAEELGVKNLILYHTE
EKTLANRKENYTREAAENFKGRIFVPDDLEVIEL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggataagattacgaatcaaattacgatgctcggaacgggaaatgctacggtttcccag
atttataatacctgctttctgctcaagactcccagcaccctgatgctggtggatgcggga
ggaggaaacggaatactggcgcagctgaagaaagtaaatgttcagatttctgacattcat
cacctcttcgttacccatgcccataccgaccatgtgttgggtgtgatctgggtaatccga
atggtggcacaatgtaagggttacgagggattgctgcatgtgtatggaaacgataaggtg
atgaaggtaatcaagaccatcatcgacatgattcttgccaagaagcaactggctaaggtg
gctgaaagggtggtgttccatcagctggaagatggggagtgtttcgaagtgggggatatg
aagctggaatgctttgatattcagtctactaaggaaaaacagttcggattccgagctgag
ctgccttcttctgatgaatcgggtaagcctttggtcttggcgtgcctgggcgatgaacct
tataacgagcagaaccgacgctacatagtgggggctgactggatgatgtgtgaggcgttc
tgcctctatgccgaccgcgatacgttcaagccttatgagaaatgccacagtacggcgctt
gatgccggaaaactggcggaggaactgggcgtgaagaatcttatcctgtatcatacggag
gagaaaacgctcgctaatcgtaaagaaaattatacccgtgaagctgccgagaacttcaag
ggtagaatctttgttccggatgatttggaggtgatagagctgtag
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