Segatella copri: LK433_06575
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Entry
LK433_06575 CDS
T07933
Name
(GenBank) biotin/lipoyl-binding protein
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
pcoi
Segatella copri
Pathway
pcoi00020
Citrate cycle (TCA cycle)
pcoi00620
Pyruvate metabolism
pcoi00720
Other carbon fixation pathways
pcoi01100
Metabolic pathways
pcoi01120
Microbial metabolism in diverse environments
pcoi01200
Carbon metabolism
pcoi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LK433_06575
00620 Pyruvate metabolism
LK433_06575
09102 Energy metabolism
00720 Other carbon fixation pathways
LK433_06575
Enzymes [BR:
pcoi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
LK433_06575
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
UEA44208
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Position
1598628..1600403
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AA seq
591 aa
AA seq
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MKKKIQFSLVYRDMWQSSGKFQPRKDQLAKIAPVIIEMGCFSRVETNGGAFEQVNLLAGE
NPNDAVRAFCKPFNEVGIKTHMLDRGLNALRMYPVPDDVRALMYKVKAKQGTNITRIFDG
LNDVRNIIPSIKWAKEGGMTPQCALCITNSPVHTLEYYMNIADQLIAAGAEEICLKDMAG
IGQPAFLGKLTKMIKDKYPQIIIQYHGHSGPGLSMASILEVCNNGADIIDTAIEPLSWGK
VHPDVISVISMLKNEGFEVPEINMSAYMKARAMTQEFIDEWLGYFINPGNKIMSSLLLGC
GLPGGMMGSMMADLGGMRQTINNIRKKKGEEELSMDDLLIKLFDEVEYVWPRVGYPPLVT
PFSQYVKNISLMNLLTMEQGKGRFVMMDDSMWGMILGKSGKIPGTIDPELVELAKKQGRE
FTDVDAHTLLTNALDDFKKEMDENGWDYGQDDEELFELAMHPEQYRNYKSGQAKKNFLAD
LQKAKDAKLGTTLTPAQLAEFKHAKADAIVAPVAGQLFWEFQGEGECQPAVEPYIGKEYK
EGDAFCYIQAPWGEFETIPAALGGKLVEINAKQGSKVRKGDVIAYIERNAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaaattcagttcagtctcgtttatcgagacatgtggcagagctctggtaag
ttccagccacgcaaggatcagttggctaaaattgccccagttatcatcgaaatgggatgc
tttagccgtgtagagactaacggcggtgccttcgaacaggttaacctcctggcaggtgaa
aaccctaacgatgccgtacgcgcattctgcaaacctttcaacgaggtgggcatcaagact
cacatgctcgaccgcggattgaacgctcttcgtatgtatcctgtgcctgacgacgtgcgc
gcccttatgtataaggtaaaggctaagcagggtaccaacatcacacgtatcttcgacgga
ctgaacgatgtgcgcaacatcattccttctatcaagtgggcaaaggagggtggcatgact
ccacagtgtgcactctgtatcaccaactctcctgttcataccctggaatattacatgaac
atcgccgaccagctcatcgctgccggtgcagaggaaatctgtttgaaggatatggcaggt
atcggccagccagcattcctcggcaagctcaccaagatgatcaaggacaagtatccacag
atcatcatccagtatcacggtcactcaggtcctggtctctctatggcttctatcctcgaa
gtctgcaacaatggtgccgacatcatcgatacagccatcgagccattgtcatggggtaag
gttcacccagacgtaatctcagttatcagcatgctgaagaacgagggcttcgaggtgcct
gaaatcaacatgagcgcttatatgaaggctcgtgctatgactcaggagttcatcgacgag
tggctcggctacttcatcaacccaggtaacaagatcatgtcttcattgttgctcggttgc
ggtctccctggcggtatgatgggttctatgatggcagacctcggcggtatgcgtcagacc
atcaacaacatccgcaagaagaagggtgaggaagagttatctatggacgacctgctcatc
aagctcttcgacgaggtagagtatgtatggccacgcgtaggttatcctccattggtaacc
ccattcagccagtatgtaaagaacatctcactgatgaacctcctcaccatggagcagggc
aagggtcgcttcgtaatgatggacgactctatgtggggtatgattctcggtaagagcggt
aagattcctggaactatcgacccagaactcgtagagctcgccaagaagcagggccgcgag
tttacagatgttgatgcacacacattgctcaccaacgccctcgacgacttcaagaaggag
atggacgagaacggttgggattacggtcaggacgacgaggaactcttcgagctcgctatg
cacccagagcagtatcgcaactacaagagcggacaggcaaagaagaacttcctggccgac
cttcagaaggcaaaggatgccaagctcggtacaacccttactcctgcacagcttgcagag
ttcaagcatgccaaggcagatgccatcgtggcaccagtagccggccagctcttctgggaa
ttccagggcgagggcgagtgccagccagctgtagagccatacatcggcaaggaatataaa
gaaggtgatgccttctgctatatccaggctccttggggcgagtttgaaaccatcccagct
gcattgggcggcaaactcgtagaaatcaatgccaagcagggcagcaaggtgcgcaagggc
gatgttatcgcttacatcgagcgcaacgctgagtaa
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