Segatella copri: LK433_06595
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Entry
LK433_06595 CDS
T07933
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pcoi
Segatella copri
Pathway
pcoi00550
Peptidoglycan biosynthesis
pcoi01100
Metabolic pathways
pcoi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LK433_06595
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LK433_06595
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcoi01003
]
LK433_06595
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcoi01011
]
LK433_06595
Enzymes [BR:
pcoi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LK433_06595
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LK433_06595
Glycosyltransferases [BR:
pcoi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LK433_06595
Peptidoglycan biosynthesis and degradation proteins [BR:
pcoi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LK433_06595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
COOH-NH2_lig
Motif
Other DBs
NCBI-ProteinID:
UEA44212
LinkDB
All DBs
Position
complement(1605928..1608477)
Genome browser
AA seq
849 aa
AA seq
DB search
MNKIKSLFAWLWQKFRAFCTWYKGLYQGRAWYTKTLVALASCIVAFILYLGAVDINFLWL
FGKSPGYFSGILDPQTSEASEIYSADGKLIGKYFNENRTPVEYDEVTPDFFKALVDTEDE
RFYKHIGIDPIGVFAAAKDALLHHNGRGASTITQQLAKNMFRVRSQYSTGLLGKIPVLRL
LIIKSKEWIIAVKLETVFSKKEIITMYANTVDFGSNSYGIKTAAKTYFNTTPKELTTGQA
AVLVGMLKATTYYNPRTNPENSLARRNTVLYNMVTHGDLSKDRYNELKDEPIKLDFKVEE
NYDGQAKYFREAVANYLKDWCKNEGYDLYTSGLKIYTTIDTRMQKYAEDAARKQMKQVQQ
NFNNHWSIRRTQAGKGNWMGQDPWQDENHNVIPNFIQGIAERQPFYKALVARFPDNPDSV
NYYYKEWVHPVKVFDYDKGSITMNMTSEDSIKYMTTFMHCAFVAMEPQTGAVKAWVGDID
FDHWKYDKVTAERQPGSTFKLFVYTEAMNQGLTPCDKRRDEYISMEVYDKKKHEMTIWRP
SNANGSFSGDSIPLKSAFAKSINSVAVRLGQEMGIKRIIETAKKMGINSPLDDTPSLALG
SSDVNLLEMACAYSTIANNGKHHDPVLVTKIVDHDGKVVYEGPTDSEQVIPYKSAFLMQQ
LLQGGMKEPGGTSQSLWGYVGNYRDTEFGGKTGTTNNHSDAWFMCVSPKLVVGAWVGGEY
RCLHFRTGALGQGSRTALPVCGYFLQSVFGDPAFQQYHGKFDKPQDSDITRDMYICASYA
PKPKVDTTKVDSTAFQEEIVLDDEGNPIIREVPAKKAESESANGTATTEEKKEKKKAKPT
EQPVNFDDL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaattaagtctctctttgcctggttatggcaaaagtttcgcgcattctgtacc
tggtacaaaggattgtatcagggcagagcgtggtataccaagaccctcgttgccttggca
agttgtatagtcgccttcatcttgtatctgggcgcagtagatatcaacttcttatggctc
ttcggcaagtcacctggctatttctcaggcattctggacccacagacctcagaggcctct
gaaatctattcggctgacggaaagctcatcggcaagtatttcaacgaaaaccgtactccg
gtagaatatgatgaggtaacacctgatttcttcaaggcactggtagataccgaggatgaa
cgattctacaagcatatcggtatcgaccctatcggtgtgtttgctgctgccaaggatgca
ctcctccatcataacgggcgcggtgcttctactatcacacagcagctggcgaagaacatg
ttccgtgtacgttcgcaatattctaccggtttgctgggtaagattcctgtactccgcctg
ctcatcatcaagagcaaggagtggatcatcgcggtaaaactagaaacggtgttcagcaag
aaggaaatcatcaccatgtatgccaatacggtagatttcggtagcaattcgtatggtatc
aaaaccgctgcgaagacctacttcaacaccacccctaaggagttgaccaccggtcaggct
gccgtgctcgtgggcatgctcaaagctaccacctactacaacccacgcaccaacccggag
aacagtcttgcacgccgcaacaccgtattatataatatggtgacacatggcgatctctca
aaagacagatacaatgaactgaaagatgagcctatcaagctcgatttcaaggtagaagaa
aactacgacggacaggctaaatacttccgtgaggcagtagccaactacctgaaagactgg
tgtaaaaacgaaggttacgacctctataccagcggtttgaagatttataccaccatcgat
acccgcatgcagaagtatgcagaagatgcagcccgcaagcagatgaaacaggtacagcaa
aacttcaacaaccactggagcatccgccgtacccaggcaggcaaaggcaactggatgggt
caggatccttggcaggatgagaaccacaacgtgataccaaacttcatccagggcatcgcc
gagcgccagccattctacaaggcattggtagcccgcttccctgataatcccgactcagta
aactattactataaggagtgggttcacccggttaaggtgttcgattatgacaagggcagc
atcacgatgaacatgacatcagaagactccatcaagtatatgaccaccttcatgcactgc
gcctttgtagccatggagccacagaccggagcagtaaaggcatgggtgggcgatatcgac
ttcgaccactggaagtatgacaaggtaacagccgagcgccagcctggttctaccttcaag
ctctttgtttataccgaggcgatgaatcagggtttaaccccttgtgacaagcgtcgcgac
gaatatatctctatggaggtatacgataagaagaagcacgaaatgaccatctggcgtcca
tccaatgccaacggttcgttctcgggcgacagcatcccattgaagagtgcctttgccaag
agtatcaactctgtggctgtaagattaggacaggagatgggcatcaagcgcatcatcgag
acagccaagaagatgggtatcaacagtccgctggatgacaccccttctctcgccctcggt
tccagcgatgtcaacctcctggagatggcatgcgcctacagcaccattgccaacaatggc
aagcaccacgacccggtattggttaccaagattgtagaccacgacggtaaggtggtttac
gagggccctaccgattccgagcaggtaataccttacaagagtgccttcctcatgcagcag
cttttacagggcggtatgaaggagccgggaggtacatcccagagtctctggggttatgta
ggcaactaccgtgataccgagttcggtggcaagacaggtaccaccaacaaccactccgat
gcctggttcatgtgtgtgagccctaagctcgtagttggtgcctgggtaggaggcgaatac
cgctgtctccacttccgcaccggagccttgggtcagggttcgagaaccgctcttcctgtg
tgcggttacttcctccagagtgtctttggcgacccagccttccagcagtatcacggcaag
tttgacaagccacaggacagcgatatcacccgcgatatgtacatctgtgcaagctatgca
ccaaagccaaaggtagataccaccaaggtagacagtaccgccttccaggaagagatcgtt
ctcgatgacgaaggcaaccctatcatccgcgaggttcctgccaagaaggctgaaagcgaa
tctgccaacggtacagccaccacagaagaaaagaaagagaagaagaaggctaagccaacg
gagcagcctgtcaacttcgatgacctttag
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