Segatella copri: LK433_08490
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Entry
LK433_08490 CDS
T07933
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcoi03016
]
LK433_08490
Enzymes [BR:
pcoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LK433_08490
Transfer RNA biogenesis [BR:
pcoi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LK433_08490
Prokaryotic type
LK433_08490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
UEA42025
LinkDB
All DBs
Position
2024500..2025417
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AA seq
305 aa
AA seq
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MEPFKVHILGCGSALPTLQHSASAQIIEMRGKCFMMDCGEGAQMQFRRTHVHFAKINAIF
ISHLHGDHCFGLLGLLSTLGMLGRTAKLKVYAPESYGDLFKRQIDFFMQGMEYEIEFVPV
DTEKSQVVYEDHSVTVETVPLQHRVPCCGYIFREKPTLPHIRRDMIDYYEIPVSQINNIK
NGADWTTKEGDVIPNARLVMPAATPRSYAYCSDTRFVPGLAEKVKGVTVLYHESTYTSEN
EDRAKLYYHSTARQAATIARNAGVGKLLLGHYSARYNNEEVLLNEAKEVFTESYLTQEGK
VFSIE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttggaaccatttaaagtacatatattggggtgtggcagtgctttgcccacccttcagcat
agtgcctcggcccagattattgagatgcgtggcaaatgctttatgatggattgtggagag
ggtgcccagatgcagttccgtcgcactcatgttcactttgctaagataaatgctatcttt
atttcacatcttcatggtgaccattgttttggtttgctgggacttctttctaccttaggc
atgctgggtagaacggctaagttaaaggtatatgcgccagaaagttacggagatttgttt
aagcgtcagattgatttcttcatgcagggaatggaatatgaaatcgaatttgttcctgta
gataccgagaagtcgcaagtagtatatgaagatcattctgtaaccgtagaaaccgttcct
ctgcagcatcgtgtgccttgttgtggttacattttcagagagaaaccgacattgcctcat
atccgtcgtgatatgatagattattacgagattcctgtaagccagattaataacatcaag
aatggagctgactggacaacgaaggagggggatgtaatacctaatgccagattggtaatg
cctgccgctactccccgcagttatgcttattgcagtgatacccggtttgttccggggttg
gcagaaaaggtaaagggggttacggtgctttatcatgagagcacctatacttcggagaat
gaggacagggctaaactctattatcacagtacggcccgacaggctgcaactatagccaga
aatgcgggtgtaggcaaacttcttctgggacattatagtgcaagatataataatgaagag
gtattgttgaatgaagctaaagaggtgtttacggaaagttatcttactcaggaaggtaaa
gtgttctctatagaataa
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