Segatella copri: LK433_09125
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Entry
LK433_09125 CDS
T07933
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoi03400
]
LK433_09125 (radA)
DNA repair and recombination proteins [BR:
pcoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LK433_09125 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
AAA
AAA_16
GvpD_P-loop
AAA_24
ATPase_2
NTPase_1
AAA_14
Isochorismatase
nSTAND3
Zn_ribbon_3
AAA_5
DZR
HypA
zf-RING_10
ABC_tran
DUF7129
Zn_ribbon_8
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
UEA42146
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Position
2162207..2163691
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AA seq
494 aa
AA seq
DB search
MAKDKIAFVCSNCGQESAKWMGKCPSCGQWNTFKEIRIAADSGSQAAKNAVMTMRHGGAA
TMFGGQHSEHDAAPMKLRDISAIDEPRIDMRDEELNRVLGGGMVPGSITLLGGEPGIGKS
TLTLQTILNMTDRRILYVSGEESAHQIKLRADRLAKGQAMLREGSSADTLKTASLSSEGA
FDHITVLCETQLEKIFSHIQEVAPQLIVIDSIQTIAAEEVDSSPGSVSQVRECAASLLRF
AKTSGIPVILIGHINKEGTLAGPKILEHIVDTVIQFEGDQHYMYRILRSIKNRFGSTSEL
GIYEMMQGGLRQVSNPSELLLTEDHDGLSGVAISAAIEGVRPFLVETQALVSTAAYGTPQ
RSATGFDQRRLNMLLAVLEKRVGFKLMQKDVFLNIAGGLRVTDPAMDLSVLAAVLSSNVD
TPIEQGWCMAGEVGLSGEVRPVSRIEQRIAEAEKLGFQHIIIPKYNNHGFDHKKYKIEIH
PVRKVEEAFRCLFG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagataagattgcttttgtgtgcagcaattgcggacaggaaagtgccaaatgg
atgggcaaatgtcctagctgcggacaatggaatacatttaaggaaattcgtattgctgct
gattccggatcgcaggctgcgaagaatgccgtaatgaccatgcgtcatggtggagctgcc
acgatgtttggcgggcagcacagcgagcacgacgctgcgccgatgaaacttcgcgatatt
tctgcgattgatgaaccgcgcatcgatatgagggacgaggagctgaaccgtgtgctgggt
ggcggaatggttcctggcagcattacgctcctgggcggtgaaccgggaatcggtaagagt
acgctcaccttgcagactattctgaacatgactgaccgccgcatcctgtatgtgagcgga
gaggaaagtgctcatcagattaaactccgtgctgaccggttggctaaaggacaggcgatg
ctcagagagggttcttctgcagacactctgaaaacggcttctctttcatcagaaggagcc
tttgatcatattacggttctctgtgaaacgcagttggagaaaatcttcagtcatattcag
gaagtggctccacagctgatagttatagattctatccaaaccattgctgcggaagaagta
gacagttcgccgggttctgtttcccaagttcgcgagtgtgcagcctccctgctccgattt
gccaagacgagtggcattccggttattctgataggacatattaataaggagggaacgctt
gccggaccaaagattctggagcacatcgtagatacggtgattcagtttgagggcgaccag
cattacatgtaccgcatcttgagaagcatcaaaaaccgattcggaagtacttctgagttg
ggaatctacgagatgatgcaaggcggactccgacaggtgagcaatccttcggagttgctg
cttactgaagatcatgacgggctttcgggtgttgccatcagtgctgccattgagggtgta
cgcccgttcctggtggaaacgcaggctttggtttcaacagcagcctatggaactccgcag
cgttcggcaactggttttgaccagcgccgtttgaacatgctcctggcggttctagagaaa
cgtgtggggttcaagctgatgcagaaggacgtgttcctgaatattgccggaggattgaga
gtaaccgatcctgccatggacttgagtgtgttggcagccgtattgagcagcaatgttgac
acgcctatcgagcaaggttggtgtatggcaggcgaggtaggtctgagcggtgaagtccgt
ccggtgagccgcatcgagcagcgtattgctgaggctgaaaaactgggattccagcacatc
atcatcccgaagtacaacaatcatggtttcgaccataagaaatataagatagaaattcat
cccgtaaggaaggtggaagaagcattccgctgcctgttcgggtga
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