Segatella copri: LK433_09145
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Entry
LK433_09145 CDS
T07933
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcoi03032
]
LK433_09145
03036 Chromosome and associated proteins [BR:
pcoi03036
]
LK433_09145
03400 DNA repair and recombination proteins [BR:
pcoi03400
]
LK433_09145
DNA replication proteins [BR:
pcoi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LK433_09145
Chromosome and associated proteins [BR:
pcoi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LK433_09145
DNA repair and recombination proteins [BR:
pcoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LK433_09145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF1129
Phage_TAC_6
BapA_N
Motif
Other DBs
NCBI-ProteinID:
UEA42150
LinkDB
All DBs
Position
complement(2167098..2167388)
Genome browser
AA seq
96 aa
AA seq
DB search
MNNKEYIAELAQQTGYSQEDTQKLVRKAIDAMIAEFEDGEAVSIPNFGTFEVKKRMERVV
VNPTTKKRQLVPPKLVLGFRPVASVKEKLKNGGDEQ
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataaggaatacatcgctgaactggctcagcaaaccggctattcgcaggaagac
acccagaagttggtgcgcaaggcgatagacgctatgattgccgagtttgaggatggagaa
gctgtctctatccccaattttggcaccttcgaagtgaagaagcgcatggagcgagtggtg
gttaatcctactaccaagaagcgccagctggtgccgcctaagttggtgttgggtttccga
ccggttgcttcggtcaaggaaaaactaaagaatggaggggatgagcaatga
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