Segatella copri: LK433_09150
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Entry
LK433_09150 CDS
T07933
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcoi03009
]
LK433_09150 (rimO)
Enzymes [BR:
pcoi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LK433_09150 (rimO)
Ribosome biogenesis [BR:
pcoi03009
]
Prokaryotic type
ribosomal protein modification factors
LK433_09150 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UEA42151
LinkDB
All DBs
Position
complement(2167446..2168747)
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AA seq
433 aa
AA seq
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MKKNQIDIITLGCSKNLVDSELLMKQFEANGYHCVHDSKRPQGEIAVINTCGFIEDAKQE
SIDTILEFIQAKEEGRLRKLYVMGCLSQRYQKELEEEMPEVDKFYGKFNYKQLLQELGKA
EVSSCNGQRHLTTPRHYAYIKIAEGCNRHCAYCAIPIITGKHVSRPKEEILQEVRELVAE
GVKEFQIIAQELTYYGVDIDGKHHITELISEMADIPGVKWIRLHYAYPNQFPMDLLDVMR
EKPNVCKYLDIALQHISDHMLTSMHRHVTKQETINLLKAIRERVPGIHIRTTLMVGFPGE
TDEDFHELLDFVREQRFERMGAFAYSEEEGTYSATHYEDNVPAEVKQRRLDELMILQQDI
SSEIEADKVGKNMTVIIDRKEGDYYIGRTEFCSPEVDPEVLIRADEKRLRVGCFYQVEIT
ASEEFDLYGKVVK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatcagatagatattattaccctgggctgctcgaagaatctcgtagacagc
gagttgctgatgaagcagtttgaggcaaacggctaccattgcgttcacgattccaagcgc
cctcagggcgagatagccgtcatcaatacgtgcggattcatcgaggatgcaaagcaggaa
agcatcgacaccatcctggagtttatccaggctaaggaagaaggccgactcagaaagctc
tacgtaatgggctgcctctcgcagcgctaccagaaggaactggaagaagaaatgcccgaa
gtggataagttctacggcaaattcaactacaagcagcttctgcaggaactcggcaaggcg
gaagtttcatcctgcaacggccagcgtcatctcaccactccgcgccattatgcctacatc
aagatagctgagggctgcaaccgccactgtgcctactgcgccattcctatcatcaccggc
aagcacgtttcccgtccgaaggaagagattctgcaggaggtgcgcgaactggtggcagaa
ggcgtgaaggagtttcagattatcgctcaggaactcacctactatggtgtagatattgac
ggcaagcatcatattaccgaactcatcagcgagatggctgatattccgggcgtgaaatgg
attcgcctgcattacgcttatccaaaccagttcccaatggatcttctggacgtgatgcgc
gagaagccaaacgtatgcaaatatctcgacattgccctccagcacatcagcgaccacatg
ctcaccagcatgcatcgccacgtaacgaagcaggaaaccatcaatctgctgaaggccatc
cgcgaacgcgtgccaggcattcacatccgcactacgctgatggttggtttcccaggcgag
acagatgaggatttccacgaactcctcgactttgtacgcgaacagagatttgagcgcatg
ggcgcctttgcctactctgaggaagaaggaacctacagcgccacccactacgaagacaac
gtgcctgccgaggtaaaacagcgccgactggacgaactgatgattctgcagcaagacatc
agctctgagattgaggctgataaggtgggcaaaaacatgaccgttatcatcgaccgcaag
gaaggcgattactacatcggacgaacagagttctgctctccggaagtagaccctgaggtt
ctgatccgtgccgacgagaagcgtctgcgtgtgggttgtttctatcaggtagaaattact
gcaagcgaggaatttgacctctatggcaaggtggtgaaataa
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