Segatella copri: LK433_10650
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Entry
LK433_10650 CDS
T07933
Name
(GenBank) hypothetical protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
pcoi
Segatella copri
Pathway
pcoi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LK433_10650
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcoi01005
]
LK433_10650
Lipopolysaccharide biosynthesis proteins [BR:
pcoi01005
]
O-antigen repeat unit
LK433_10650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF739
Motif
Other DBs
NCBI-ProteinID:
UEA42422
LinkDB
All DBs
Position
2510925..2511794
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AA seq
289 aa
AA seq
DB search
MYKYRMLGVVTLYNPEIEQVATNINLFLPFIDKLIIWDNSYKDKSVRKRMESLLQNEEEK
VLWHVTGENLYIAPAIEFAWNYAKSEHYDFVLTMDQDSKWEDFGAYRKEIEMFFSKNIFC
VYTPYILGGDKWPICKEIQQRRIFINSGTVYPTKILNAIGGIDKRFPLDALDHDLSIRVQ
KAGFSIVCLTNYNLSHTMGNPTSAKWLPIKANNYSAWRTKEITRSQVLLWRKHRDWLTLK
DKYRIIKDFFIMRILRIILLEDDKFNRIKMMINGIKTGITYKMTNEYGK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatatagaatgcttggggtagtaacattatataacccagaaatagaacaggtt
gctactaatattaatttatttcttcctttcatagacaaactcattatctgggataattca
tataaggataaatctgtacgaaagagaatggagagcttattgcaaaatgaggaagaaaaa
gttttatggcatgttacaggagaaaatttatatatcgctcctgcaatagaatttgcatgg
aattatgcgaaatccgaacattacgattttgttctaacgatggatcaagatagtaaatgg
gaagattttggagcataccgtaaagaaatagaaatgtttttttcaaaaaacatattttgt
gtttatactccgtacatactgggtggagacaaatggccaatttgcaaagaaattcaacaa
cgccgaatattcataaactcaggaacagtatatccaaccaaaattttaaatgctatagga
ggaattgacaaacgctttcctttggatgcacttgatcatgacttgtccataagagttcag
aaagcaggttttagtattgtgtgtttaacaaattacaatttaagtcacacaatgggcaat
cccactagtgcaaaatggctgccaattaaagccaataattatagtgcctggcgaactaaa
gaaataaccagaagccaagtattattatggcgcaaacatcgcgattggctaaccctcaaa
gataaatatcgaataattaaagatttttttatcatgcgaattttgagaatcatcttacta
gaagatgataaatttaatcgcattaaaatgatgataaacggaataaaaactggcattaca
tataaaatgacgaatgaatatggaaaataa
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