Segatella copri: LK433_11115
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Entry
LK433_11115 CDS
T07933
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoi03400
]
LK433_11115
DNA repair and recombination proteins [BR:
pcoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LK433_11115
Archaeal homologous recombinant proteins
LK433_11115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
SMC_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UEA42512
LinkDB
All DBs
Position
2615583..2619038
Genome browser
AA seq
1151 aa
AA seq
DB search
MKFLQLEILNLASLDKQGGEVINFEEGALGESTIFSIVGPTGSGKSTLLDAICLALYNRA
PRYPRKKGDKNQNIEIFGAADASESNRLAPTDSRNILTRGKKEGYSKLTFLANNGSIYRA
EWHVRFQRVRYENAKTALYKITRNGEEITEETADWNELPNIIGLDYDQFLRTVLIAQGSF
ANFLTAKENERYELLEKLIGCEETYTNIATEIKKAKDQATDAYNQMAASVEAVKQNLLND
EELAQLKEEIARLEKAEKELDSQLQAISKDLQWFEENDKQIKQITICQTDMEQAADAIKA
MQAQILRLQLHDEVQPAVNLLQEVERQTQSIHEQEENILKAEGNIKSQESAISESEKTLA
SLKEAVSKAQEQLEKALPVIAEARALKAKMEAAMPNLKEKKEALELAQKENQTAQKDVEE
NARNIQKWEAETEKANLALKTTQEEIAKQKQVLHEATQAAEQAWETERNKTAGQNIEELQ
SHKSAAEKKLQDVQQAIKVVAHLDTATKEKQKNEERILVLGKRNAEIDAALGKLTIEALT
QETLTLRNAYTLMVSEKWEIHRANLTEGKPCPLCGSTTHPYHTDNRQFEEATTELSQLLK
VKENLLKLQQKEEKVLSGERKQNDGEVQTLQKQQEKLSEEIATYEEDWKALIAQYPKIPK
AEAELKSLLPIYENKAKDASSKLSLFNKIQKEIERLTQLKDKAVKDEAAYESKASTIQNK
AQESTSTCATKLAEQKALTSNLISQQKSKEEAYVKALQAWNSAKKEMEEWQAQYQQILNG
EEPDAAEQRLTAAKDEATKAADKQNENINKLKAELANSKGSHQTMLSQNKTMKENLLAKE
KELDLWIEEYNKQLEEKSIEGKDSEEEGIEERSIEPSLIDRNTIREMLHSAEDWNAIRRE
KDEKEKAVASTTALYQSAEKAHQQHLEHQPAQTRDALLAIQQEYQERSQRNELIAANARM
QNHQEAVKQLGDKAEALNLVTQEKDDWTAITDAIGADGKTLRKIAQCYTLSFLIAHANQE
IRKFNSRYELQQVKHSLGIRVIDHDRADDIRDTTSLSGGETFIVSLGLALGLSALSSRNI
SFENLFIDEGFGTLDPDTLATVIDSLAMLQSSQGKKVGVISHTDTMSERITTQIRIIKNG
NSGSSHIEIYP
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcctacaactcgaaatactcaacctcgcttcgcttgacaaacagggaggcgag
gtcatcaactttgaagaaggtgccttaggcgagagcaccatcttcagcatcgtaggtccg
acgggaagtggcaagtccaccctactcgatgctatctgtctggctctctacaaccgcgcc
cctcgctaccccaggaagaaaggcgacaagaaccagaacatcgagattttcggagctgcc
gatgccagcgaaagtaaccgtctggcacctaccgacagccgaaacatcctgacccggggc
aagaaggaaggctacagcaaactcaccttccttgccaacaacggcagcatctatcgcgca
gaatggcacgtcagattccagagagtgcgctacgagaacgccaagactgcgctctataaa
atcacaagaaacggcgaagagataacggaggaaactgccgactggaacgagctgccgaac
atcatcggactcgactacgaccagtttctccgcaccgtactcatcgcccaaggctcattt
gccaacttcctgacggcgaaggaaaacgagcggtacgaactcctggaaaaactcatcgga
tgcgaggaaacttatacgaacatcgctactgaaatcaagaaggcgaaagaccaggcgacg
gatgcctacaaccagatggcagcatcggtggaagccgttaaacagaacctgctgaacgat
gaagaactcgcccaactgaaggaggaaatcgcccgcttggaaaaggctgagaaggaactc
gacagccagttgcaagccatttcgaaagacctgcaatggtttgaggaaaacgataagcaa
atcaagcaaatcactatttgccagactgatatggagcaagcagcagatgccattaaagcg
atgcaagcccagattctccgtcttcagttgcacgatgaagtacagccagccgtcaacctg
ctgcaggaagtagagcgacagacgcaaagcatccacgagcaggaagaaaacattctgaaa
gcggaaggaaacatcaaaagtcaagagtctgccatcagcgaaagcgagaaaactctcgcc
agtctgaaggaagcagtaagcaaggcacaggaacagctggaaaaggcgctgccggtcatc
gcagaagcaagagcgctgaaagccaaaatggaagcggcgatgccgaatctgaaagaaaag
aaagaggcattggagttggctcagaaagagaatcaaactgcccagaaagacgtggaggaa
aacgcccgaaacatccaaaaatgggaagcagaaacggagaaagcgaaccttgccctcaaa
acaacacaggaagagattgccaagcagaaacaggttctgcacgaagcgacgcaagccgct
gaacaggcttgggagacggaaagaaataagactgccggacagaacatagaggagctgcag
agccataaatcggcagccgaaaagaaactgcaggatgtccagcaagccatcaaggttgtg
gctcatctcgatactgccacaaaagaaaagcagaagaatgaggagcgcatcctggtcttg
ggcaagagaaacgctgagatagatgcagccctgggcaagttgaccatcgaggcgctgaca
caagagaccctgacgctgagaaatgcctataccctcatggtgagcgagaaatgggagatt
catcgtgccaacctgaccgaaggcaaaccgtgtccgctctgtggcagcacgacccatcct
tatcataccgacaacagacagtttgaggaagccaccacggaactctctcaacttctgaaa
gtcaaggagaatctgctgaaactgcagcagaaagaggagaaggttctttccggcgagaga
aaacagaacgatggcgaagtacagacgctccagaaacaacaggaaaagctctcggaagaa
atagcaacttacgaagaggattggaaggcgctcatcgcccagtatccaaagattccaaag
gcagaggcagaactgaaatcgctcttgcctatctatgaaaacaaggcgaaagatgcgagc
agcaaactgagcctctttaacaagattcagaaagagatagaacggctgacccaactcaag
gataaggctgtaaaggatgaagctgcgtatgaaagcaaggcttctactatacagaacaaa
gcccaagaaagcacttcaacctgcgcaacaaaactagctgagcaaaaagcacttacatcc
aacctcatctcgcaacagaagagtaaggaggaggcttacgtgaaagcccttcaggcatgg
aatagcgccaagaaggaaatggaggaatggcaggcgcaataccagcagattctgaatggc
gaagaaccagacgcggctgaacaaagactgacagcagcaaaggatgaggcaacaaaagca
gcagataagcagaacgagaacattaacaaactgaaggcggaactcgccaacagcaaaggt
tcgcatcaaaccatgctgtctcagaacaagacgatgaaagagaatctgctggcgaaggaa
aaggaactcgacctttggattgaggaatacaacaagcagcttgaagaaaagagcatcgaa
ggaaaagactccgaagaggaaggcatcgaggaaagaagcatcgagccaagccttatcgac
cgaaataccatccgggagatgcttcactctgccgaagattggaacgctatccgacgggaa
aaggacgaaaaggagaaagccgtggcttcgactaccgccctttaccagagtgcagaaaag
gcgcatcagcagcacttggaacatcagcctgcccaaacccgtgatgctctcctagccatt
cagcaggagtatcaggagagaagccagcgcaacgaactgattgctgccaacgccaggatg
cagaaccatcaggaagccgtgaagcagttgggtgacaaggctgaggctctgaatctagta
acacaggaaaaggacgactggacagccattacggatgccatcggagctgacggcaagacg
ctgcgcaagatagcccaatgctatacactcagtttcctgatagcgcacgccaaccaggaa
atcagaaagttcaacagccgttacgaactgcagcaggtaaagcattccttgggcatccga
gtcatcgaccacgaccgtgccgacgacatccgagacaccacctccctatcaggtggcgaa
accttcatcgtgagtctcggtctcgccttgggcctgtcggcattatcctcccgcaacatc
tccttcgaaaacctgttcatcgacgaaggctttggaaccctcgaccccgataccctagcc
accgtcatcgactccctcgccatgctgcaaagttcgcaaggcaagaaggtgggcgtcatc
agtcataccgacacgatgagcgagcgcatcaccacccagataaggattatcaagaatggc
aactccggcagcagccatatcgaaatctatccgtaa
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