Segatella copri: LK433_11160
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Entry
LK433_11160 CDS
T07933
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcoi
Segatella copri
Pathway
pcoi03420
Nucleotide excision repair
pcoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LK433_11160
03430 Mismatch repair
LK433_11160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoi03400
]
LK433_11160
Enzymes [BR:
pcoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK433_11160
DNA repair and recombination proteins [BR:
pcoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK433_11160
MMR (mismatch excision repair)
Other MMR factors
LK433_11160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UEA42520
LinkDB
All DBs
Position
complement(2626722..2629232)
Genome browser
AA seq
836 aa
AA seq
DB search
MDLLNDLNEAQRAAVEYIDGPSLVIAGAGSGKTRVLTYKIAYLLSQGMKPWSIMALTFTN
KAAREMKERIGKLVGNDLAQHLYMGTFHSIFSRILRAEAEHIGFNNNFTIYDESDSRSLI
KAIVKEMGLDDKKYKPAAVHAKISMAKNNLMSAAAYESDATIFEQNKRAQMPEVGKIFVA
YVQRCKQANAMDFDDLLMLTYQLFREHEDIRHKYAARFDYVLVDEYQDTNHVQMSIVMQL
CQEKQRVCAVGDDSQSIYSFRGANIDNILNFQRQFQGTRLFKLEQNYRSTQTIVEAANSL
IKHNRNQIPKDVFSENAKGEKIQYKPAYSDKEEAAIVAKDVKRIRREDGCQYSDFAILYR
TNSQSRSFEEEFRKQGIPYRIYGGLSFYQRKEIKDIIAYFRLVANPNDEEAIKRIINYPA
RGIGATTVLKIADCAHQNQVSFWEVIGAPERYGLAVNKGTMNKLETFRLLISSFIERAQT
TDVYELGDAIIKESGISQDIMSGKDADDLARQENLEEFLSGMSAFVEERREEGKFDELFL
QDYLQDVALLTDADSDGDKDEPRVSLMTVHAAKGLEFPTVFVVGLEENIFPSPLSATSLR
DLEEERRLLYVAITRAEKHCILTNAKNRWRYGKMEFDNPSRFIDEIDGKLIDSLDEAGGS
LFGSMSDQPEWARAQRPRRPWEDAEQPRYSSRYQNSKPVASQFVADPKPSLFDDEPETSR
ISGRSSVSGRSSLSEGNFKSVRALNAAKRYMETHSSHPASRGTGSSAASVSSSTASSAGS
SSCGLQEGIKIEHQRFGRGTVLKIEGTGENTKATVEFVHSGTKQLLLKYAKFTLVD
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggatttactgaacgacttgaacgaagcgcagcgtgctgcggtagaatatattgacgga
ccttcgctggtgatagccggtgcaggttcgggtaagacgcgtgtgcttacttataaaata
gcttatctcctgagccagggcatgaaaccctggagcatcatggcgctcacctttaccaac
aaggcggctagggagatgaaggaacgtatcggaaaactggtgggaaatgatctcgcccag
catctctatatgggtaccttccacagcatcttctcccgaatcctgagagcggaggctgag
catatcggcttcaacaacaactttaccatttatgacgaaagtgactcgcgctcgctgatc
aaggcgatagtgaaggagatggggctggatgataagaagtataagcctgctgccgttcat
gccaagatttcgatggcgaagaacaacctgatgagtgctgcggcttatgagagcgatgcg
actatcttcgagcagaacaagcgtgcgcagatgcctgaggttggtaagattttcgtggct
tacgtgcagcgctgcaagcaggccaatgccatggatttcgatgatttgctgatgcttacc
tatcagctcttcagggagcatgaggatattcgccacaaatatgccgcccgcttcgattat
gttctggtggatgagtatcaggataccaatcacgttcagatgtctatcgtcatgcaactc
tgtcaggagaagcagcgtgtttgtgccgtgggtgatgactcgcagagtatctatagtttc
cgtggtgccaatatcgataatattctcaactttcagcgccagtttcagggcacgcgtctc
ttcaaactggagcagaattaccgttctacccagaccatcgttgaggcggctaacagtctg
atcaagcataaccgcaaccagattcctaaggatgtgttcagcgagaatgcgaagggtgag
aagattcagtataagcctgcttacagcgacaaggaagaggcggcgattgtggcgaaggac
gtgaagcgtatccggcgcgaggatggctgccagtatagtgattttgccattctataccgc
accaattcccagagtcgcagcttcgaggaggagttcagaaagcagggtattccttatcgc
atttatggcggactgagtttctaccagcgcaaggaaattaaggatattattgcttatttc
cgtctggtagcgaatccgaatgatgaagaggctatcaagcgtatcatcaactatccggct
cgtggaatcggtgctactacggtgctgaagattgctgactgtgcccatcagaaccaggtg
agtttctgggaggtgatcggtgcccctgagcggtatggactggcggttaacaagggtacg
atgaacaagctggaaaccttcagattgctgatttcttcgtttatcgaacgggctcaaacc
acggatgtctatgaattgggtgatgccattatcaaggagagtggtatcagtcaggatatc
atgtcgggcaaggatgccgatgatctggcacgtcaggagaacctggaggaattcttgagc
ggtatgtcggcttttgtggaggaacggcgtgaagagggtaagttcgatgaactcttcctg
caggattatctgcaggatgtggcgctgcttaccgatgctgacagcgatggtgataaggat
gaacctcgtgtttctctgatgacggttcatgctgccaagggtctggagtttcctacggtt
ttcgtggttggtttggaagagaatatcttcccgagtccgctttctgcaacttcgctccga
gacctggaggaggaacggagattgctttacgtagccattacgcgagctgagaaacattgt
atcctgacgaacgccaagaaccgctggcgatatggcaagatggagtttgataatccgagt
cggtttatcgatgagattgacggcaagttgattgatagcctggatgaggctggtggaagc
ttgtttggctctatgtctgaccagccggagtgggcgagagcgcaacgtcctcgcagaccg
tgggaggatgctgagcagcctagatacagtagcaggtatcagaattccaaaccggtagca
tcgcagtttgtggcagatcctaagccttctctctttgatgatgaaccggagacttcacgt
atttccggacgctcgtctgtttccggacgctcatctctctctgaaggtaatttcaagtct
gttagagcgctgaatgcagcgaagcgttatatggagacgcattcttctcatcctgcttct
cgcggtacaggatcttctgcagcatcagtttcttcttctacagcttcatctgctggcagt
tcttcttgcggtttgcaggagggaataaagattgaacatcaacgttttggacggggaacg
gtgttgaagattgaaggtactggtgagaatacgaaggctacggttgagttcgttcattct
ggcaccaaacagcttctgctgaaatatgccaagtttacgttagtagattaa
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