Segatella copri: LK433_11370
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Entry
LK433_11370 CDS
T07933
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcoi
Segatella copri
Pathway
pcoi00061
Fatty acid biosynthesis
pcoi01100
Metabolic pathways
pcoi01212
Fatty acid metabolism
pcoi02024
Quorum sensing
pcoi04146
Peroxisome
Module
pcoi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LK433_11370
00071 Fatty acid degradation
LK433_11370
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LK433_11370
09145 Cellular community - prokaryotes
02024 Quorum sensing
LK433_11370
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcoi01004
]
LK433_11370
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcoi04147
]
LK433_11370
Enzymes [BR:
pcoi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LK433_11370
Lipid biosynthesis proteins [BR:
pcoi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LK433_11370
Exosome [BR:
pcoi04147
]
Exosomal proteins
Exosomal proteins of breast milk
LK433_11370
Exosomal proteins of breast cancer cells
LK433_11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UEA42561
LinkDB
All DBs
Position
2675607..2677271
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AA seq
554 aa
AA seq
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MEIPSFNALIQKSIVDHWDMDALTDYKGATLQYHDVARKIEKLHIMFENSGVVKGDKIAL
CGRNSANWAVAFLATLTYGAIAVPILHEFMPDQIHNIVNHSDAKLLFVGDVVATQIDATK
MPGLEGIIYIPDYSLVVSRTDKLTYAREHLNEMFGIKYPKYFRKNHVNYYMEQNPDELAM
INYTSGTTGFSKGVMVPYRALWGNADFAEDVLGKKIKPGDSIISILPMAHMYGMAFEFIF
EFIKGCHIFYLTRIPSPAIIAEAFGRIKPAVIIAVPLVIEKIIRKKVFPKIQNNRMRMLL
HMPVISKKVKEKICDQVTNAFGGNFYEVIIGGAAFNQEVESFLHSVGFKYTVGYGATECA
PIICYEDYKNFVPGSCGKAALHMMVRIDSPDPENVPGEILAKGPNVMLGYYKNEEATKQT
IDENGWYHTGDLGTMDGDGNVFIKGRSKNMLLGANGQNIYPEEIEDKLNSLALVAESVVI
QKGDKLIALVHPDYDEAQTLNLGTKELADVMEQNRQELNTMIPAYSKVSEIRIHEDEFEK
TPKKSIKRFLYTAE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagattccaagctttaacgcactcatccaaaagagcatcgtagaccattgggatatg
gatgctctgacagactacaagggagcaaccttgcagtaccatgatgtagcacgcaaaatt
gagaagctacacatcatgtttgagaactctggtgtagtaaagggcgacaagatagcactt
tgcggtcgaaatagcgcaaactgggctgtagcattccttgctacccttacctatggtgcc
attgccgtacctatcctgcatgaattcatgccagaccagattcacaacatagtaaaccac
agcgatgccaaactgctctttgtgggtgatgttgtagctacacagattgatgcaacgaag
atgccaggtcttgaaggcatcatctatataccggattattcacttgtcgtttcacgtacc
gacaagttgacttatgcgcgcgaacacctcaacgagatgttcggtatcaagtatcctaag
tacttccgcaaaaaccatgtcaactactatatggaacagaatccggatgagttggctatg
atcaactataccagcggaactaccggtttctccaagggagtaatggttccataccgtgca
ctctggggcaatgcagattttgctgaggacgtactgggtaagaagatcaagccgggagat
tctatcatcagtatcctgccgatggcccacatgtacggcatggcgtttgaatttatcttc
gaattcatcaagggctgccacatcttctatctcacccgcatccctagcccagccatcatc
gccgaggcattcggccgcatcaagccagccgtcatcatagctgtacctctggttatcgag
aagattatccgcaagaaggtattccctaagatccagaacaaccgtatgcgtatgctgctc
cacatgcctgtaatcagcaagaaggtgaaggagaagatatgcgaccaggtaaccaatgcc
ttcggtggcaacttctacgaggtgattatcggtggtgcagcctttaaccaggaagtggaa
agtttcctccatagcgtaggtttcaaatataccgtgggatatggcgcaacagaatgtgcc
cctatcatctgctacgaggattacaaaaacttcgtaccgggctcttgcggtaaggctgcc
ctccacatgatggtccgcatcgacagtcctgatcctgagaatgtaccgggcgaaatcctt
gccaagggtcctaacgtaatgttgggttactataagaatgaggaagctaccaagcagacc
atcgacgagaacggatggtatcatacaggcgacctcggaaccatggatggtgacggcaac
gtcttcatcaagggtcgtagcaagaacatgctgctcggcgcaaacggtcagaatatctac
cctgaggagattgaggataaactcaactctttggctctggtagcggaaagcgtggttata
cagaagggcgacaagctcattgctctggttcacccagactatgatgaagctcagaccctg
aacctcggtaccaaagaactggcagatgtcatggagcagaaccgccaggagctcaacacc
atgattcctgcttacagcaaagtatcagaaatacgtatacatgaagatgagtttgaaaag
actcctaagaagagtatcaagcgattcctctatacggcagaataa
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