Segatella copri: LK433_11845
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Entry
LK433_11845 CDS
T07933
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_11845
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_11845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
UEA42650
LinkDB
All DBs
Position
complement(2798288..2799964)
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AA seq
558 aa
AA seq
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MNKKHILMSALILSSMALTSCDDFLDTSSKTKMNSETAYSTPAAADMDLVGCYDGWQRTL
SDEGVGMYLTAEFASEQAFAGLGLSDAKNNNAIDQFDLTVAPSYTDLFNTDWKNYYQAIY
RCNQLIQADATIKWNGDTKAEGRIMGEARALRGILYFDLARLFGDVPLLLEPSEANIPRT
PVKEVYQSIFDDLKYAAANIPADAYPLKDRDSNDGRITKYAAEALLARAYLYYTGYYGEE
HPACSKAEATAAINDVVENGGYELEKNYADFWMPSCTKDASSTGNYAWETTYAGKWYDGK
TWKAGQGSLSKEIVLNLKLNSTHDYNGNGDGNTFSVYLGPRNRCATDICIASGWGACPVT
PYFVEQFRNDPRFNACVWSCKDAGFTADESDSYEYTGYYTRKYAPMCFADGTRQEVGFQL
GEQHQNITYYQDYTIMRYADVLLMHSELNGTADGLNKVRARVGLEPEDYSIENIRKERAI
ELAFEGVHFWDLMRYGKDGSYAAQEIAKAQNGAKVKNGGVEAATKFAVDNFTSKKGLMQI
PNTQITLSGNVLTQNAGW
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaacatatattgatgagtgccctgattctctcttccatggctttgacgtca
tgcgatgacttcctggacacttcatctaagacaaagatgaattccgagactgcttacagc
acaccggctgcagcagacatggatcttgtgggctgctacgatggatggcagcgtacattg
agcgatgaaggtgtcggtatgtacctgacggctgagtttgcctccgagcaggctttcgca
ggcttgggtctttctgatgccaagaacaataatgccatcgaccagtttgatttgacagtt
gctccatcatatacagatctcttcaatacagattggaagaattattatcaggccatctac
cgttgcaatcagctgattcaggctgatgctaccatcaagtggaatggtgataccaaggca
gaaggccgtatcatgggcgaggctcgtgcccttcgtggcatcctctatttcgatttggcc
cgtttgtttggtgatgtgcctttgttgctcgaaccttctgaggctaacataccgcgtact
ccggtgaaggaagtatatcagtctatcttcgatgacttgaagtatgccgcagccaatatt
cctgccgatgcttatcctttgaaggaccgtgattccaatgatggccgcatcaccaagtat
gctgctgaggctttgctggctcgcgcatacctttattatacgggatattacggcgaggag
catcctgcatgttccaaggctgaggctactgctgccatcaatgatgtggtagaaaacggt
ggctatgagttggagaagaactatgccgatttctggatgccttcctgtaccaaggatgct
tcttcaacgggtaactatgcctgggaaacaacctatgccggcaagtggtatgacggaaag
acctggaaggcaggacagggtagtctctctaaggagattgtcttgaacctgaagctgaac
tctacccacgattacaatggcaatggtgatggtaataccttctcggtatatttgggtcct
cgcaaccgttgtgctactgatatatgcatcgccagtggttggggagcttgcccggttact
ccttatttcgtagagcagtttagaaacgatcctcgtttcaatgcctgtgtctggagctgc
aaggatgccggttttacagcagatgagtctgactcttatgagtatacgggttattatacc
cgcaagtatgctccaatgtgttttgccgatggtactcgacaggaagtgggcttccagttg
ggtgagcagcatcagaacatcacttactatcaggattataccatcatgcgttatgctgat
gtgctcttgatgcactctgagctgaatggcactgccgatggtctgaacaaggtacgtgcc
cgtgtgggtcttgaaccagaagactacagtattgagaatattcgcaaggagcgcgccatc
gagttggctttcgaaggtgttcacttctgggatttgatgcgttacggcaaggatggttct
tatgcagcacaggaaattgccaaggctcagaatggtgccaaggtaaagaatggtggagtg
gaggcagctaccaagtttgctgttgacaactttaccagcaagaagggtctgatgcagatt
cctaatactcagattacgctttccggtaacgttctgactcagaatgccggatggtaa
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