Segatella copri: LK433_12075
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Entry
LK433_12075 CDS
T07933
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
pcoi
Segatella copri
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
Sigma54_activ_2
AAA_2
AAA_5
HTH_50
HTH_28
Mg_chelatase
Mga
HTH_Tnp_ISL3
HTH_23
HTH_30
Ccdc124
HTH_17
HTH_29
Lipoprotein_6
MCM
HTH_7
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UEA42694
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Position
2862741..2864087
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AA seq
448 aa
AA seq
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MDTSELQKIKQRYNIVGNSDGLNHALDVALQVAPTDLSVLIIGESGVGKEIIPRVIHDNS
PRRREKYFAINCGSIPEGTIDSELFGHEKGSFTGAIGESEGYFGIANKGTIFLDEVGELP
IQTQARLLRVLETGEYIRVGGTEIRKTDVRIVAATNVNMRKAVSEGRFREDLYYRLNTIP
IQMPALRERGDDILLLFRLFAMQMAEKYRLPKISLSDEAKQIMLKYKWPGNVRQLKNITE
QMSVLSREREIDAQTLTQFIPRDEESTQLATIQKDGKDDHSYSSERELLYKILYELRGNV
SDLRREMNSLRKQLDKARQLGGTGGYVSPVQPNTQVAPVSSVSPVPAVSSVPSVSPVSSV
PPITDLDELQHIRQEIATRGIRGTYKPEAEDAEIEEIKEENENLNLSDLSKQMIEKALER
NNGNRKKAAEELGISDRTLYRKINKYKL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggatacttccgaactacaaaagataaaacaacgctacaatatcgtcggtaacagcgac
ggattgaaccatgcgctcgacgtagccctacaggtagcgccgaccgatctctccgtgctc
atcattggcgagagcggtgtgggtaaggaaatcattccaagggtgattcacgacaattcg
ccacgccgcagagagaaatatttcgccatcaactgtggaagcattccggagggaaccatt
gacagcgaactcttcggacatgagaagggttccttcactggagccataggcgaaagcgaa
ggatacttcggtattgccaacaagggtaccatcttcctcgacgaggtgggcgaactcccg
attcagacgcaggcaagactgctgcgcgtgctcgaaacgggagaatacatccgcgtgggt
ggaactgagataaggaaaacggatgtccgcatcgtggcagccaccaacgtaaacatgcgc
aaggctgtgagcgaaggacgctttcgcgaggacctctactaccgcctcaacaccatcccg
atacagatgcctgcattgagagagcgtggcgacgacatcctcctgctcttccgcctcttc
gccatgcagatggccgaaaaataccgtctgcctaagatttcactctcagatgaggccaag
cagatcatgctgaaatacaagtggccgggaaatgtgagacagctcaagaacattaccgaa
cagatgtcagtgctgagccgagaaagagaaatcgatgcacagactctcactcagtttatt
ccgagagatgaggagtctacacagctcgccaccatacagaaggatggcaaggacgaccat
agctactccagcgagcgcgaactgctatacaagattctctacgaactgaggggcaacgtg
agcgacctgagacgagagatgaacagcctgcgcaagcaactcgataaggcacgccagttg
ggcggtacaggcggatatgtttctccggttcagccgaatacccaggtagctccagtatca
tccgtatctccggttccggccgtatcatccgttccatcggtttctccggtatcgtccgta
cctccgattaccgatctcgatgagctacaacacatccgtcaggaaatagctacaagaggc
attaggggcacttacaaacccgaagccgaggatgctgagatagaggagatcaaggaagaa
aacgagaatctgaacctcagcgaccttagcaagcagatgatagaaaaggcattggagaga
aacaacggaaaccgcaagaaagcggcagaagaactgggaatctccgacagaactctgtac
agaaagattaacaaatataagttatga
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