Segatella copri: LK433_12150
Help
Entry
LK433_12150 CDS
T07933
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
pcoi
Segatella copri
Pathway
pcoi00260
Glycine, serine and threonine metabolism
pcoi00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pcoi01100
Metabolic pathways
pcoi01110
Biosynthesis of secondary metabolites
pcoi01230
Biosynthesis of amino acids
Module
pcoi_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LK433_12150 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
LK433_12150 (trpB)
Enzymes [BR:
pcoi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
LK433_12150 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
gp45-slide_C
Motif
Other DBs
NCBI-ProteinID:
UEA42706
LinkDB
All DBs
Position
complement(2876644..2877843)
Genome browser
AA seq
399 aa
AA seq
DB search
MYQVDEKGFFGKFGGAYVPEILYKCVTELQQAYKPIIESEEFKKEYRALLKDYVGRPSPL
YYAKRMSEKYGCQLYLKREDLNHTGAHKINNTIGQILMAKKMGKTRIIAETGAGQHGVAT
ATVCALMNMKCEIFMGATDVERQHTNVERMKMLGAKVNPVRTGNMTLSDACSEAIRDWCC
HPQDTFYIVGSTMGPHPYPDIVAKMQSVISEELKWQLEEKIGRNYPDYLIACVGGGSNAA
GTIYHYIDDDRVKIYLAEAAGHGIDTDYTAATMHCGTEGIIHGARTLVMQTEDGQIEEAF
TISAGLDYPGIGPMHADLATSGRSHVLAIKDDEAIYAGYELTRMEGIIPAIESAHAVAAL
KKMKFKKDDVVVLTVSGRGDKDVETYLAHKEMAGEYGNF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaagttgacgaaaaaggattttttggaaaattcggaggagcgtatgttcctgag
atattatataaatgtgtaaccgagttgcagcaggcttacaagccaatcattgagagcgag
gagttcaagaaggaataccgtgcgctgctgaaagattatgtgggccgtccttcacctctt
tattatgccaagcgcatgagcgagaagtacggatgccagctctatctgaagcgcgaggac
ctgaaccataccggtgcacacaaaattaacaacaccatcggtcagattctcatggccaag
aagatgggcaagacccgcatcattgccgaaaccggagccggacagcacggtgtggctaca
gctacggtatgcgctctgatgaacatgaagtgtgagattttcatgggtgccaccgatgtg
gaacgccagcataccaacgtagagcgtatgaagatgctgggagccaaggtgaaccctgtg
cgcaccggcaacatgacgctgagcgatgcctgctctgaggccatacgcgactggtgctgc
cacccacaggataccttctacatcgtaggttctaccatgggtccgcacccttatccagac
attgttgccaagatgcagagcgtaataagcgaagaactgaaatggcagcttgaggagaag
ataggccgcaactatcctgattacctcatcgcctgcgtgggtggcggaagcaacgctgcc
ggaaccatctaccactacattgatgatgaccgcgtgaagatatatctggctgaggctgcc
ggacacggaatagataccgattataccgctgccaccatgcactgcggcacagaaggcatc
atccacggagcacgcaccctcgtgatgcagaccgaggacggacagattgaggaagccttc
accatcagtgccggtctcgactatccgggcatcggccctatgcacgccgaccttgccaca
tcgggcaggagccatgtgctcgccattaaggacgatgaggccatctacgccggttacgag
ctcacccgcatggagggcatcattccggctattgagagtgcacacgccgtggcagccctg
aagaagatgaagttcaagaaggatgatgtggtggtgctcaccgtatcaggccgtggcgac
aaggatgtagaaacctatctcgcgcacaaggaaatggcgggagagtacggaaatttttaa
DBGET
integrated database retrieval system
