Segatella copri: LK433_12205
Help
Entry
LK433_12205 CDS
T07933
Name
(GenBank) glycoside hydrolase N-terminal domain-containing protein
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
pcoi
Segatella copri
Pathway
pcoi00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LK433_12205
Enzymes [BR:
pcoi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
LK433_12205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_95_cat
Glyco_hyd_65N_2
Glyco_hydro_95_C
Big_5
Reelin_subrepeat-B
Bactofilin
Motif
Other DBs
NCBI-ProteinID:
UEA42716
LinkDB
All DBs
Position
2889700..2893431
Genome browser
AA seq
1243 aa
AA seq
DB search
MMSHLFHVALMLLAFTFANPVISHAQQTAVASWVFSEGWESSSSGTVVTYTPDGSGWQAI
SNTAWKSKQPVFLPNTCSGVRTNYKLSLKTSDGKWEVKQSKDSYVLRLNTASIDKFTQKE
NYGDASTHDQYFEVNFPTVNLNNVKLNFAIGDGSSSSTHFGVAYSVDGGTTWTTLDDYVS
GSHWNKYNDAVYSLDADNKENVIVRLFIVSATKNSNYNLKYVKVLADDNEAPAFVSSRPK
DNEDNVVTTGTIALNFDESVHVADGAEATLTNANTNSVVKLAPTVNGNVIRFSYSALDKS
AKYNFELPANTVSDLSGNVLAKALTFSFITADTNPIPAPTIESKNHLWYNKPAGYWEEAL
PLGNGRLGVMHSGSVACDTLQLNEDTFWDQGPNTNYNANAFGVLREVQQGIFNKDYASVQ
NLAVTNWMSQGSHGASYRAAGVVLLGFPGQRFDDMESAQTSDAVDAQGYVRYLDMNTATS
NVEYHVKGVGYKRTVFTSFKDNVTVVRLEADQKGKLDFNVAYAGCNKSNIEKLTSNVLYD
EHTVKATMGPARDKCENVENKLNLCTYLRIVDTDGTITNDNVNIYAQGTVGAATNAPRLN
VTGATYATIIISQATNFKKYDDVSGDASASALAYLEAYENSKKDYVTTLSDHESVYRAQF
DRVDLTLAGNATQESKNTEQRIKEFHKTSDPQLAANYFQFGRYLLISSSQPGTQPANLQG
IWNPDARQYPAWDSKYTSNINVEMNYWPAEVTNLAECHEPFVEMVKDVSVTGAETAKKMY
GARGWALHHNTDIWRTTGAVDNGTVGVWPTCNAWFCSHLWERYLFSGDKTYLAEVYPIMK
GAAEFFQDFLVKDPNTGYMVVCPSNSPENHPGIGSYTKPDGKTANIALFGGVAMDNEMVY
DLLKNTALAARALDKDADFADALDALKAQITPWKIGQYGQVQEWQEDWDKENSSHRHLSH
LWGAYPGNQVSPYENATLYQAVHKSLVGRGDAARGWSMGWKEAMWARMLDGDHAMKILKN
QLVLLDPNVTIASSDGGSYANMFDAHPPFQIDGNFGATAAIAEMLVQSHAGFLHVLPALP
TEWKAGGEVKGLCARGGFVVTDMKWVDGKIEKLAVKSTVGGNLRLRTATPLTNADGTALS
VAEGNNTNSLMQPYGMPEPIVKDASKIPATTLPDTYLYDIPTNAGEEITLVGGLATIVPV
LGLSRESEKDNAIYNLNGQRVGEGYHGVVVVKGKKYVKSLESR
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtcatttattccatgtggctctgatgcttttggcttttacctttgcgaatcct
gttatcagccatgcgcaacagacagctgttgcgtcatgggtgttctcagagggatgggaa
agctcaagcagcggaactgttgtgacctacactccggatggcagcggatggcaggcgata
agcaataccgcatggaaaagtaaacaaccggtgtttctgccgaacacatgttctggagta
cggaccaactataagctttcgctgaagacaagtgacggtaagtgggaggtaaagcaaagt
aaggacagctatgtcttgcgtctgaacacagcttcgatagataaatttacacaaaaggaa
aactatggtgatgcctcaacacatgaccaatatttcgaagtgaatttccctactgtaaac
ctgaacaacgtgaaacttaatttcgctataggcgacggctcaagtagctccacacatttt
ggtgtggcgtattccgttgatggagggacgacatggacaacacttgatgactatgtcagc
ggcagtcattggaataaatataatgatgctgtttactctcttgatgccgacaataaggag
aatgtcatagtgagactctttattgtcagtgccacgaagaatagcaattacaatctgaaa
tatgtaaaggtgcttgctgacgacaatgaagcaccggcattcgtatcaagccgtccaaag
gataatgaggataatgtcgtgacaacaggaaccattgctttgaactttgacgagagtgtg
catgtggcggatggggcagaggcaacgcttacgaatgcaaatacaaacagtgttgtcaag
cttgctccaacagtaaacggcaatgtaattcgtttcagctattctgctcttgacaaaagt
gcgaagtataactttgagctaccggcaaatacagtaagtgacctttctggaaatgtgctt
gcgaaagccttgacgttcagtttcatcaccgccgataccaatccgatacctgctcctaca
atagaaagcaagaatcatttgtggtacaacaagccagcaggctattgggaagaagctcta
ccgttgggaaacggtcgtcttggtgttatgcactccggtagtgtcgcatgcgatacgctc
cagctcaacgaagatacattctgggaccagggaccgaacacgaactataatgcaaatgct
tttggagtactcagagaagtacagcaaggcatcttcaataaagattatgcttcggtacag
aatcttgcagttacgaactggatgtcgcaaggctcgcatggagcaagttatcgtgcagca
ggtgttgtcttgcttggcttcccgggacagcgtttcgatgatatggaaagtgcacagact
tcggatgctgttgatgcacaaggctatgttcgctatcttgatatgaatacagcaacaagc
aatgtggagtatcatgtgaaaggtgtagggtataagcgtacagtattcacttctttcaag
gataatgtcacagtggtgcgtcttgaagcggaccagaaaggtaaactcgacttcaatgtg
gcttatgccggttgtaataagtcgaatatagagaagctcacgtctaacgtcctctatgac
gagcatactgtcaaggcaacgatgggaccggcacgtgacaagtgtgagaatgtggaaaac
aagctcaacctttgtacttatctgcgtattgtggacactgacggcactattacaaacgac
aatgtcaatatctatgctcagggaacagtgggagccgctacaaatgctccgcgtcttaat
gtgacaggtgctacatacgctacaatcattatttcgcaagccactaatttcaagaaatat
gatgatgtaagcggtgatgcaagtgcatcagctcttgcctatctggaagcttacgagaac
agcaagaaagattatgttacaacgctttcggatcatgaatctgtctacagggcacagttt
gaccgtgtggacctgactcttgcaggtaatgctacacaggagtccaagaacacggaacag
cgtataaaggagttccataagacttctgatcctcagttggcagccaactacttccagttt
ggacgttacctgctcatatcttcttcacaaccaggcacacagccagctaatctgcagggc
atctggaatcctgatgcgcgtcagtatccggcttgggattcgaaatacacatcaaatatc
aatgttgagatgaactactggcctgcagaagtcacaaatcttgcagaatgccatgagccg
tttgtcgagatggtcaaggatgtaagtgttacaggtgcggaaacagctaagaagatgtat
ggcgcacgtggatgggctttacatcataatacagatatttggcgtacgacaggtgcggta
gacaatggcaccgtaggagtatggcctacatgtaacgcatggttctgctctcacctttgg
gagcgttatctcttctctggcgacaagacatatcttgcagaggtctatcctataatgaag
ggagcggcagaattcttccaggattttcttgtgaaggatccgaatacagggtatatggtt
gtttgtccgagcaactcaccggagaatcatcctggtataggctcttataccaagcctgac
ggtaaaactgcaaacattgcccttttcggaggagttgccatggataacgagatggtctat
gacttgttgaagaatacagctcttgcagctcgtgctcttgataaggatgcggatttcgca
gatgctcttgatgctctgaaggcacagattactccatggaagattggtcaatacggacag
gtacaggaatggcaggaagactgggataaagagaattcgtctcatcgtcatctgtctcat
ctctggggcgcttatcctggcaatcaggtttctccatacgaaaacgctacactttatcag
gcagtacacaagagtcttgtcggacgtggcgatgctgcccgcggatggtcgatgggatgg
aaggaagccatgtgggcacgtatgcttgatggagaccatgccatgaagattcttaagaac
cagcttgtcctgctcgaccctaatgtgacaatcgcttcttccgacggcggctcgtatgca
aatatgtttgatgcccatcctccattccagattgacggaaacttcggagctactgcagct
atagcagagatgcttgtgcagtcacatgccggcttcttgcatgttcttcctgcattgcct
acggaatggaaagccggtggcgaagtgaaaggactgtgtgcccgtggcggatttgtggtg
acagatatgaaatgggttgacggcaagatagagaagcttgcagtgaagtctactgtcggc
ggaaacttacgtctgcgtactgcaacaccattgacaaatgccgatggtacagctctttct
gtagcagaaggcaataataccaattctttgatgcagccttacggcatgccggagcctata
gtcaaggatgcaagtaagattcctgccactacgcttccggatacttatctctatgatatt
ccaactaatgcaggtgaggagataacgcttgttggaggccttgctactattgttccggta
ttaggtctttccagagaatctgaaaaagataatgctatatataatcttaacggtcagcgt
gttggagaaggttatcatggcgtagttgtcgttaagggaaagaaatatgttaaatcatta
gagtcccgttaa
DBGET
integrated database retrieval system
