Segatella copri: LK433_12240
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Entry
LK433_12240 CDS
T07933
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcoi
Segatella copri
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_12240
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_12240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_14
Motif
Other DBs
NCBI-ProteinID:
UEA42723
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Position
2909482..2911191
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AA seq
569 aa
AA seq
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MKKILYSVALAACCMGTMTSCSDFLDASNKSNVTAKQSFATKEGLNNLVNNAYQHLQNVY
AAPLFTSCFSAGTDMYADARNKMNEALNTYETLTPENTDIKNLYTYLYSGIRAANSVSYY
AQTAQVDEKTKGQLVGEARVLAAYEYYLLVNNFGGVPIMKDFLTTADTGYPKSSAADVYA
YIISELEDVISKNVLQASTATKGGGRISQETAKAILAKTYLSAAWDLNKQEYFSKAAALA
DEVIAGRRLTTPFAKLWKADGSGDDNEEFLWDVEYDLATANNTTSGGTEWSGYYCNYLGG
NEDNIKATTSSYVPTLYALHCFKKGDQRYDATFMKELPDINKGNAANTGYWTWYKNGESL
VGKPVTRYYSAWYETDADFEAWKAIDPANRANTYRIPMDSQSKEAQNMDGRDMEYYDNQQ
LVYGSSPCKKFDDSKTAKTEKNTCYRDIHIITLPEMYLVAAEAYLKAGDNPKALARLNEV
HQRAGLSALTGTISIDDILDENACENFGNEARWMDLRRTQTLVERCTKYNHEMGDKAAQY
IGKKLLRPIPQAAIDANDQLTLADQNPGY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatattatatagcgtagcattggcggcctgctgcatgggaaccatgacaagt
tgcagcgacttcctggatgccagcaacaagtcgaatgtaactgccaaacagagttttgcg
acaaaagagggattaaacaacctcgtcaataatgcctatcagcatctgcaaaacgtttat
gcagctcctctgttcactagctgtttctcagcaggtacagacatgtatgccgatgcccgt
aacaagatgaacgaggcattgaacacttacgagaccttgactccagaaaatacggatatc
aagaatctctatacttacctctattcaggtatacgtgcagccaactctgtgtcatattat
gcacagacagcccaagttgatgaaaagactaaggggcagcttgtaggcgaagcccgtgta
ttggcagcctacgagtattatcttctggtaaacaacttcggtggtgtccctatcatgaag
gacttcctcaccacagcagacacaggatatcctaagtcttctgctgcagatgtatatgcc
tatatcatcagcgaactcgaagatgttatcagcaagaatgtgctccaagcttctacagct
accaagggtggcggcagaatcagccaggaaacagccaaggctatccttgccaagacctac
ctttctgctgcatgggacctcaacaagcaggaatacttctccaaggcagcagctcttgcc
gatgaagtaattgcaggcagaagactgactaccccatttgccaagctctggaaggcagac
ggatcgggcgatgacaacgaagagttcctttgggatgtggaatatgatttggctacagcc
aacaatacaacatcaggtggtacagaatggagcggttactactgcaactatctgggtgga
aacgaggataacatcaaggctacaacctccagctatgtaccaaccctctatgccttgcat
tgtttcaagaagggagaccagcgttacgatgctaccttcatgaaggaattgccagatata
aacaagggaaatgctgcaaataccggttactggacctggtacaagaatggtgagagtctg
gtaggtaagccagtaacgcgatactattctgcatggtatgaaacagatgccgactttgaa
gcatggaaggctatagatcctgcaaacagagcaaacacctatcgcattccgatggattca
cagagcaaggaagcacagaatatggacggcagagatatggaatattacgataaccagcaa
ctggtatatggttccagtccatgcaagaagtttgacgacagcaagactgctaagacagag
aagaacacctgctatcgcgacatccatatcatcactttgccagagatgtatctcgtagca
gctgaggcttatctgaaggctggtgataatcctaaggcattggcacgactcaatgaggtt
caccagcgcgctggtctttctgcacttacaggaactatctctatcgatgacatccttgat
gagaatgcctgcgagaacttcggtaatgaggctcgttggatggatcttcgcagaacccag
actctggtagagcgttgcaccaagtataaccatgagatgggagacaaggctgcccagtat
atcggcaagaagcttcttcgccctatcccacaggctgcaattgatgccaatgaccaactg
acattagccgaccagaatcctggttactaa
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